Gene
| Gene Model ID | pfu_aug2.0_2655.1_18887 |
|---|---|
| Locus | scaffold2655.1 : 50327 ... 82825 : - |
| To GenomeBrowser | scaffold2655.1:50327..82825 |
| Genes list of scaffold | scaffold2655.1 |
| Synonym | pfu_aug1.0_3257.1_08574 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2655.1_18887.t2 | 4 | 1 | zf-B_box | 16 | 56 | 2.2e-23 | 81.8 | 4.2e-07 | 0.00051 | 19.8 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 2 | zf-B_box | 69 | 104 | 2.2e-23 | 81.8 | 9.8e-10 | 1.2e-06 | 28.2 |
| pfu_aug2.0_2655.1_18887.t2 | 5 | 1 | Reg_prop | 295 | 315 | 8.5e-06 | 25.1 | 0.037 | 45.0 | 4.5 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 1 | SGL | 300 | 337 | 2.3e-06 | 27.2 | 1.0 | 1200.0 | -1.5 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 2 | SGL | 360 | 492 | 2.3e-06 | 27.2 | 0.0031 | 3.8 | 6.8 |
| pfu_aug2.0_2655.1_18887.t2 | 5 | 2 | Reg_prop | 513 | 525 | 8.5e-06 | 25.1 | 0.16 | 200.0 | 2.6 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 3 | zf-B_box | 547 | 587 | 2.2e-23 | 81.8 | 4.1e-06 | 0.005 | 16.6 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 4 | zf-B_box | 600 | 635 | 2.2e-23 | 81.8 | 5.7e-12 | 7.1e-09 | 35.4 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 3 | SGL | 829 | 864 | 2.3e-06 | 27.2 | 0.19 | 240.0 | 0.9 |
| pfu_aug2.0_2655.1_18887.t2 | 5 | 3 | Reg_prop | 829 | 842 | 8.5e-06 | 25.1 | 0.019 | 24.0 | 5.4 |
| pfu_aug2.0_2655.1_18887.t2 | 4 | 4 | SGL | 915 | 1062 | 2.3e-06 | 27.2 | 0.00044 | 0.55 | 9.5 |
| pfu_aug2.0_2655.1_18887.t2 | 5 | 4 | Reg_prop | 953 | 966 | 8.5e-06 | 25.1 | 0.92 | 1100.0 | 0.2 |
| pfu_aug2.0_2655.1_18887.t2 | 5 | 5 | Reg_prop | 1044 | 1056 | 8.5e-06 | 25.1 | 0.013 | 16.0 | 5.9 |
Transcript
| Transcript ID | pfu_aug2.0_2655.1_18887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2655.1_18887.t1 atggactggaattgccctgcctataatgacgtcatggcgcgtcagcttataaaatatcatggaaacatcacagcagagtc gataattcgtgacgttgtaccaatagtgcagactggtgatctgctggtttcagtctatgacttgacgaacaattttgcat atattgcaaatgccagagcttccttcgagggtggtgctccctttgcttatcaaaggtcttatgtcaaactcaacatgaca gatatattcagtatcattccaccggaattcaaaaacgggtcgtacttgtaa |
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| Transcript ID | pfu_aug2.0_2655.1_18887.t2 |
| Definition | - |
>pfu_aug2.0_2655.1_18887.t2 atggcattttcgaaatcggttaacccggcgcatgcccaaacagctgtcccatgtgatgtttgtgaagacgaagctcccgg agaatactactgtatagaatgtaaacatacgctctgtcaacaatgtgataaattacatagaaagttcaccaaaggtcaca atgtagtactgaggacccaactaggtgccatagataccacggtactgacctgtactgaccatggagacacaccctcattt cactgtgagagatgcaatatacttgtttgtggtacatgtatcactggaaagcacagaggacatgagatgtctgaccttga tgaccttttaaacagggaaaagaaggtcctgcaacatgatatcaccagaatggaagaaagtttgagtaaattcaaaaagg aaagagaaaatattattgcggagaacaaaaagtatgacgacaaaatacggcaaataacatcagatatggaaactgagatc aagtctgcccataaagagatagataggattcacaatgagagaatggaaaacttagcaagcatacgacaaaaacactcatc aatttgtgatggtcgtactacagaggtcaagaacaaaatagagatacttgaagaaagaataacagagtacaaggcaaccg taaggaacaacagccttccagcattaatccacctttcaacaagaaatgattccattcctgagattcggcataaaccagaa atactagaacctccagttttcgtacctggaaacttacataaacttgggaactatgtaggaaaagtacagatatcttcttc cacagcagaagcaaagacagtatttgaaagatatccattgaaactcacatctccgaccattgtctcaaagttcaaatatc cattgcagcgatacccatgtatatgtattacaaaggaaggtgatgtgttgcttggtggatatgattccagagagctgcat atggtgaacatcaaaggtcaggtactcaggaggatgaagataaagaacagaccttacgcactggctgttagaaattgtgg tgacgtcatcataagtcctcatcatgatgattccagttcagtcagcagacttttgagagatggcagagaacaacacgtgt ttgatacatcgccgtcaagtactgcaggagtatctgtcacaccttgccagaacatattgatctgtactagtgatgggaga gtagtgaagatcaatgttgacggtactaacgccaaacagatctacaaaggctctgatgattactcacttaaacatgcagt agagaacgaatatggctacatcttcatcggggacaggacaaaaggtgctgtgttggtgatgagtagaaatggtaaactcc tgtcaacaattagacaaacagaagaagaaatcatgatatggccacttggattactggttgacaaaatgggtaatacctta tgttcagatcctgagagtcatgaactttatatcattaatcagaaatttcagatgaagacattgatagatggttcatttgg acttgtggaacctcgatggatggttgtggacaatgattacaatctatgggtaagccacattttaaacacggtgatggcat tttcgaaatcggttaacctgtcgcatgcccaaacacctgtaccatgtgatgtctgtgaagacaaaactcccggagaatac tactgtatagaatgtaaacataccctctgtcctccatgtgagaaatatcatagaacgttcaccaaaggtcacaatgttgt actaaggacccaagtaggtgacatagataccacagtcttgacctgtactgaccacggagaccaagcctcatttcactgtg agaaatgtaacgtaccagtctgtggtaaatgtatcactggcgaacacagagggcatgagatgtctgacctgactgagctt tttgacagggaaaagaaagtcctgcaacatgatatcaccagaatggaagacattttgagtaaatcaaaaaaacaaagaga agaaattaatgtggagaaaaaaaagtatgacggcaaaatacagaaaacaaccacagatttggaaactgagaagaagtctg ccatgaaagagctggatagaatttataacaataaaatgaaagacctagccaccatccgacaaaaacactcatcaatcttt gaggttcgcactacagaaatcaggaacagaatggatacacttgaggaaagaataaaagagtacaagaaagccatgaatac aaacagccttccagccttaatccaactttcgagaagaaaggagtcgatcccagagataggcagtaagccagaaataccag aaccccctgtgtttgtatctgggagcctacagaaactaggagaaaatctaggaaaattacaggtatcctcttcttcagta gaagcaaaaccaaggagaaatccattgaaacttacaaaaccgactattgtatcaaaattcaaatgtccatcgaagggaga cccatctatatgtatcagcaaggaaggtgacgtgtggcttggtggacttgaatctagagaactggtaatggtgaacatca aaggtcatgtacttaagaggaggacgatacagaacagacctaaagcactggctgtgatggactgtggagatgtcatcata agcccaaatagtaatgattccatggcaatcagcagatgtctaagagatgggacagaacaacagatttttgatgaaacacc gtcttatttagtgtccatcaccgctgaccagaagatactgatttgtacagaagatgggagagtagtgaggatcaatggtg acgggtctaatatcaaacaaatttatacgggctctggttataactcagctatacatgctgtagaaaatgctgatggaaac atttacatcagtgactataacaagtcagctgttgtgatgatcaccaaagatggcaaggtcttgacaacaataacacaaac tgtagaaggagaaaaattaatatggccaataggattagtggtagacaaaatgggtaacactttatgtacagatgatcatt ttgaaaagggttgtttgtatatcattaatcagaaagggcagatgaggaaattgatagatagttcgtttgaccaccaggag cctcgctttctggctgtggataatgacaacaatctgtggataacacattacgatggaactgtccttgttgtgaaaccaag tgcacaagttgaaagaagggaggacaatttccaacaagaccctgctgcagcaccaacagtaaaacacgaaaacacccgat gcgaagacactaaagacgagcataccaagagacggaaaggagacacacaacatataagcatgaaacacaaaagactacac ataaaccaaagagaccagtcggtaaccggtgccgactttggacggccatttgccacgttggatgcagctttagatctaga acttgatgtcactagagagtttacaggaaaatacttctttgaggaagcacagggacttgcagatggctcaggagctgatt taaagcgcattctgagaatccacatgattggtgaattaacaaaaggtagctgttcaatgttgggagcttgggatacagct gtacctaatcctaactcacttatacaactaagggcacttgattggagcgtcgacgggccattcaaggactttcctcaagt aacggtgtatcatccgataaacgatggcaagaacggtcaagacttcgcgaactttggatggacaggatggataggatcaa tcacagtatataatgaagattttgcgataaaaatttttaatcgacagtttatactgcgggacatccttcaatttgacaaa actctggacgatgctattaatagattaagcaatgccaaaaggacatgcgatctcatccttggtgtaggggacggaatgga ctggaattgccctgcctataatgacgtcatggcgcgtcagcttataaaatatcatggaaacatcacagcagagtcgataa ttcgtgacgttgtaccaatagtgcagactggtgatctgctggtttcagtctatgacttgacgaacaattttgcatatatt gcaaatgccagagcttccttcgagggtggtgctccctttgcttatcaaaggtcttatgtcaaactcaacatgacagatat attcagtatcattccaccggaattcaaaaacgggtcgtacttgtaa |
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Protein
| Protein ID | pfu_aug2.0_2655.1_18887.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2655.1_18887.t1 MDWNCPAYNDVMARQLIKYHGNITAESIIRDVVPIVQTGDLLVSVYDLTNNFAYIANARASFEGGAPFAYQRSYVKLNMT DIFSIIPPEFKNGSYL |
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| Protein ID | pfu_aug2.0_2655.1_18887.t2 |
| Definition | - |
>pfu_aug2.0_2655.1_18887.t2 MAFSKSVNPAHAQTAVPCDVCEDEAPGEYYCIECKHTLCQQCDKLHRKFTKGHNVVLRTQLGAIDTTVLTCTDHGDTPSF HCERCNILVCGTCITGKHRGHEMSDLDDLLNREKKVLQHDITRMEESLSKFKKERENIIAENKKYDDKIRQITSDMETEI KSAHKEIDRIHNERMENLASIRQKHSSICDGRTTEVKNKIEILEERITEYKATVRNNSLPALIHLSTRNDSIPEIRHKPE ILEPPVFVPGNLHKLGNYVGKVQISSSTAEAKTVFERYPLKLTSPTIVSKFKYPLQRYPCICITKEGDVLLGGYDSRELH MVNIKGQVLRRMKIKNRPYALAVRNCGDVIISPHHDDSSSVSRLLRDGREQHVFDTSPSSTAGVSVTPCQNILICTSDGR VVKINVDGTNAKQIYKGSDDYSLKHAVENEYGYIFIGDRTKGAVLVMSRNGKLLSTIRQTEEEIMIWPLGLLVDKMGNTL CSDPESHELYIINQKFQMKTLIDGSFGLVEPRWMVVDNDYNLWVSHILNTVMAFSKSVNLSHAQTPVPCDVCEDKTPGEY YCIECKHTLCPPCEKYHRTFTKGHNVVLRTQVGDIDTTVLTCTDHGDQASFHCEKCNVPVCGKCITGEHRGHEMSDLTEL FDREKKVLQHDITRMEDILSKSKKQREEINVEKKKYDGKIQKTTTDLETEKKSAMKELDRIYNNKMKDLATIRQKHSSIF EVRTTEIRNRMDTLEERIKEYKKAMNTNSLPALIQLSRRKESIPEIGSKPEIPEPPVFVSGSLQKLGENLGKLQVSSSSV EAKPRRNPLKLTKPTIVSKFKCPSKGDPSICISKEGDVWLGGLESRELVMVNIKGHVLKRRTIQNRPKALAVMDCGDVII SPNSNDSMAISRCLRDGTEQQIFDETPSYLVSITADQKILICTEDGRVVRINGDGSNIKQIYTGSGYNSAIHAVENADGN IYISDYNKSAVVMITKDGKVLTTITQTVEGEKLIWPIGLVVDKMGNTLCTDDHFEKGCLYIINQKGQMRKLIDSSFDHQE PRFLAVDNDNNLWITHYDGTVLVVKPSAQVERREDNFQQDPAAAPTVKHENTRCEDTKDEHTKRRKGDTQHISMKHKRLH INQRDQSVTGADFGRPFATLDAALDLELDVTREFTGKYFFEEAQGLADGSGADLKRILRIHMIGELTKGSCSMLGAWDTA VPNPNSLIQLRALDWSVDGPFKDFPQVTVYHPINDGKNGQDFANFGWTGWIGSITVYNEDFAIKIFNRQFILRDILQFDK TLDDAINRLSNAKRTCDLILGVGDGMDWNCPAYNDVMARQLIKYHGNITAESIIRDVVPIVQTGDLLVSVYDLTNNFAYI ANARASFEGGAPFAYQRSYVKLNMTDIFSIIPPEFKNGSYL |
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