Gene
| Gene Model ID | pfu_aug2.0_266.1_20512 |
|---|---|
| Locus | scaffold266.1 : 139887 ... 143855 : - |
| To GenomeBrowser | scaffold266.1:139887..143855 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_11185.1_10280 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20512.t1 | 2 | 1 | G-patch_2 | 160 | 187 | 1.7e-08 | 34.1 | 1.0 | 5200.0 | -2.7 |
| pfu_aug2.0_266.1_20512.t1 | 2 | 2 | G-patch_2 | 374 | 426 | 1.7e-08 | 34.1 | 1.9e-11 | 9.3e-08 | 31.8 |
| pfu_aug2.0_266.1_20512.t1 | 1 | 1 | G-patch | 381 | 423 | 3.0e-16 | 58.9 | 1.8e-19 | 8.8e-16 | 57.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20512.t1 | gi|676482008|ref|XP_009062559.1| | hypothetical protein LOTGIDRAFT_166870 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_266.1_20512.t1 | gi|524901076|ref|XP_005106952.1| | PREDICTED: G patch domain-containing protein 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_266.1_20512.t1 | gi|632972526|ref|XP_007902702.1| | PREDICTED: G patch domain-containing protein 2 isoform X3 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_266.1_20512.t1 | gi|585696211|ref|XP_006822164.1| | PREDICTED: G patch domain-containing protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_266.1_20512.t1 | gi|632972518|ref|XP_007902698.1| | PREDICTED: G patch domain-containing protein 2 isoform X1 [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20512.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20512.t1 atggatgagttagtacaagaccttgctcatgccttggaggagtctgctcaaccatccacttcacgtagtcatacatccat cgtcaaacgccatcacaagaaaaggaaagggaaaaagagaaggactgtgattgagggtggaaacatgagtgaggcatcag agagtagcattgatgaggcattcagagattacatagagagtatagcccagatgagcgactccgatgacctggctctctca catcaggttgccaggctaagtctaccccctgatactactctagtaccatcggtcgagtcagattctgttaatgaaaactt ttcaccaatcaggccacaaaggagaagaaagaaatataaaacaatggcagtggatgttgatcctagctcagagatcagat cagactttctgttaccaaattctgatgttaagcccaaatacaaaactcatcgtcttagttcagggggtatgaatatggtg gatcagtatggtgattcactaagctctaacatggagggctttttccctggtaaaagaaaaaggagttctaaatccacgtc taagatggagagtagtggtgcgctaggtaaaggtgctgatataccagaggaccaaatggaagcaaacattcaggagagca gttccagtttaagcagtagtgagagtgatggattgttgacaaatgacgaggggagagaggctgatgatgagcagagtgat ttttactatgagtctggtccagccagcggtatcccagggattataaagtggtgggagaatgactctgaggacggtgagat ggagtctgataaacagttccagcaaatcatgaatggctcctttgaacatttacctcgatcatcacagctagcattcaggg ccagagttacaaaaatgattgccaagacaggaagagagttcagatttggcagaaggaagcttaaagaaaagtcaccagga tatactgtgtctagatttcttgaggatcaacagatgtggaactctatgcagggaattctcaccccagggagacatgggac gggaaatggaaatggaaacaattaccccaaacggcggaagaaaacaccccctcccccaaccacaggttttatctgtgaga atgcagaccctataccggagtcaaacattggtaacaagatgttacagagtatgggatggactcctggctcaggactggga ccagacggaggggggatcaaaacacctatcatggctcatagacgacaaaaacgacaagggctcggctgtagctcacatcc gtatagtaggagcttaaacgactcgtaa |
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Protein
| Protein ID | pfu_aug2.0_266.1_20512.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20512.t1 MDELVQDLAHALEESAQPSTSRSHTSIVKRHHKKRKGKKRRTVIEGGNMSEASESSIDEAFRDYIESIAQMSDSDDLALS HQVARLSLPPDTTLVPSVESDSVNENFSPIRPQRRRKKYKTMAVDVDPSSEIRSDFLLPNSDVKPKYKTHRLSSGGMNMV DQYGDSLSSNMEGFFPGKRKRSSKSTSKMESSGALGKGADIPEDQMEANIQESSSSLSSSESDGLLTNDEGREADDEQSD FYYESGPASGIPGIIKWWENDSEDGEMESDKQFQQIMNGSFEHLPRSSQLAFRARVTKMIAKTGREFRFGRRKLKEKSPG YTVSRFLEDQQMWNSMQGILTPGRHGTGNGNGNNYPKRRKKTPPPPTTGFICENADPIPESNIGNKMLQSMGWTPGSGLG PDGGGIKTPIMAHRRQKRQGLGCSSHPYSRSLNDS |
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