Gene
| Gene Model ID | pfu_aug2.0_266.1_20514 |
|---|---|
| Locus | scaffold266.1 : 153717 ... 162625 : - |
| To GenomeBrowser | scaffold266.1:153717..162625 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_11185.1_10282 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20514.t1 | 1 | 1 | Methyltransf_23 | 72 | 188 | 9.1e-06 | 25.4 | 9.7e-09 | 1.3e-05 | 24.9 |
| pfu_aug2.0_266.1_20514.t1 | 1 | 1 | Methyltransf_18 | 75 | 182 | 3.7e-09 | 37.1 | 4.7e-12 | 6.4e-09 | 36.3 |
| pfu_aug2.0_266.1_20514.t1 | 1 | 1 | Methyltransf_31 | 75 | 195 | 8.8e-09 | 35.1 | 8.6e-12 | 1.2e-08 | 34.7 |
| pfu_aug2.0_266.1_20514.t1 | 1 | 1 | Methyltransf_26 | 75 | 184 | 2.2e-08 | 34.1 | 2.6e-11 | 3.5e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20514.t1 | gi|530583145|ref|XP_005285404.1| | PREDICTED: uncharacterized protein LOC101950356 isoform X3 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_266.1_20514.t1 | gi|504144771|ref|XP_004584810.1| | PREDICTED: uncharacterized protein LOC101534855 [Ochotona princeps] | 0.0 |
| pfu_aug2.0_266.1_20514.t1 | gi|532073851|ref|XP_005322734.1| | PREDICTED: uncharacterized protein LOC101964833 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_266.1_20514.t1 | gi|511907923|ref|XP_004773405.1| | 0.0 | |
| pfu_aug2.0_266.1_20514.t1 | gi|591381637|ref|XP_007065354.1| | PREDICTED: uncharacterized protein LOC102938422 [Chelonia mydas] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20514.t1 atgctgactaatgctgattgtaaccctgccagcacagttcatgttgatgcattctgttatgatgatgatgatatagatga tttatgtgaggggggaacaatgtccagaaattactgtgtggaatgtgggtcacataatacaaaacctctcacattcatca ctcactcagcttcagtaaagcagatcaaatatacctacaagtatttactgccagatttaggaggtaaaacagtactggat gtggggtcaaggacaggggccatgttatatggtggctacctatacagtagagctcagaccattataggagtagagatgga cccaagtttctgtcagctacaacaaaaaattgtgtctgacttcaaattccaggacagaattcagattatccaaaatgatg ttctcaattgtggagatatcctttcttctgctgacgtggtgatactgaacaatgtttttgaatttttcctgagtcctgat caacagaggaggacatgggagtttttgtcatccaagctgagaaaatctgggtcagtgttagtcacagtaccagctgtgga ggaatcattacaaactatacaaagtaacattgacgcgacaagttggctgaggccagttaacacgacatcctcactggaca gagccaacatgatactatatggtaccacagactctgagggatcagatttaaacgaaatattctgttatgaagtcatatag |
|
Protein
| Protein ID | pfu_aug2.0_266.1_20514.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20514.t1 MLTNADCNPASTVHVDAFCYDDDDIDDLCEGGTMSRNYCVECGSHNTKPLTFITHSASVKQIKYTYKYLLPDLGGKTVLD VGSRTGAMLYGGYLYSRAQTIIGVEMDPSFCQLQQKIVSDFKFQDRIQIIQNDVLNCGDILSSADVVILNNVFEFFLSPD QQRRTWEFLSSKLRKSGSVLVTVPAVEESLQTIQSNIDATSWLRPVNTTSSLDRANMILYGTTDSEGSDLNEIFCYEVI |
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