Gene
| Gene Model ID | pfu_aug2.0_266.1_20517 |
|---|---|
| Locus | scaffold266.1 : 198683 ... 206704 : - |
| To GenomeBrowser | scaffold266.1:198683..206704 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_2293.1_66266 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20517.t1 | 1 | 1 | AIG1 | 58 | 262 | 5.4e-33 | 113.9 | 9.9e-37 | 7.4e-33 | 113.4 |
| pfu_aug2.0_266.1_20517.t1 | 1 | 1 | MMR_HSR1 | 59 | 184 | 2.5e-08 | 33.8 | 6.3e-12 | 4.7e-08 | 33.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20517.t1 | gi|395541395|ref|XP_003772630.1| | 2.0e-25 | |
| pfu_aug2.0_266.1_20517.t1 | gi|742088373|ref|XP_010831136.1| | PREDICTED: GTPase IMAP family member 4-like, partial [Bison bison bison] | 3.0e-24 |
| pfu_aug2.0_266.1_20517.t1 | gi|548464170|ref|XP_005679638.1| | PREDICTED: GTPase IMAP family member 4-like [Capra hircus] | 4.0e-24 |
| pfu_aug2.0_266.1_20517.t1 | gi|591352488|ref|XP_007070691.1| | PREDICTED: GTPase IMAP family member 4-like, partial [Chelonia mydas] | 1.0e-23 |
| pfu_aug2.0_266.1_20517.t1 | gi|697478871|ref|XP_009671768.1| | PREDICTED: GTPase IMAP family member 7-like [Struthio camelus australis] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20517.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20517.t1 atggcggaaggtggatgtccatcctgttctcatagtcatcccgaggggtctgaatgtcaaaatccagcacctacgacttc ggcacaagcggcggtttccgatgatatgcagtcaataaacccagggcctcactatgttgcggggaataccagagttgtcg tagatactgagaggcggataatactgattggtaaaataggtgctggaaagagccaatcagggaacgccattcttggttat aaatacaatgaagttttcaaagcaaaaaaggcgctaaaatcggtgacgtcagaagtaatgtatggtacatcagtgatgaa tgggaaaaggtaccgtgtgtatgataccccaggggcgctgaacccagacgacaaagaactgttttcagagcagctattaa agtgtatatactgtacttcaccaggatttcattgtttgactgtggttatttcagtggcagagagaccgaataaagaagac cttcagttgtataaaaatctgaagaagtatttaggagaccgttttcaggagcacgctgttatcatatttactaaagttga ggacaaggccgagcttgacgacatcttggctccggcggattgtccggaaattaacgagttgatacgaagctgtggtcgga gatatatttgctttggggaggataggaagggagtgaaacaagaatttgttgatcaatatcatgaaatgctcgaagaactt ataaaagacaatgttaggcataaaatggacttttataaacatcctttgtatgataaagcacaggacttcatagcgaaaga tgcaaaagaaattaggaaaaatgacagtgccatctcagaaagtcaagcattagagctggcaagggagagagctatcaatg gagaatcagattgcaatgctgatatgaaaaaggaaatcaagaggtggtgtccttgttcaattctttga |
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Protein
| Protein ID | pfu_aug2.0_266.1_20517.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20517.t1 MAEGGCPSCSHSHPEGSECQNPAPTTSAQAAVSDDMQSINPGPHYVAGNTRVVVDTERRIILIGKIGAGKSQSGNAILGY KYNEVFKAKKALKSVTSEVMYGTSVMNGKRYRVYDTPGALNPDDKELFSEQLLKCIYCTSPGFHCLTVVISVAERPNKED LQLYKNLKKYLGDRFQEHAVIIFTKVEDKAELDDILAPADCPEINELIRSCGRRYICFGEDRKGVKQEFVDQYHEMLEEL IKDNVRHKMDFYKHPLYDKAQDFIAKDAKEIRKNDSAISESQALELARERAINGESDCNADMKKEIKRWCPCSIL |
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