Gene
| Gene Model ID | pfu_aug2.0_266.1_20518 |
|---|---|
| Locus | scaffold266.1 : 207725 ... 211054 : + |
| To GenomeBrowser | scaffold266.1:207725..211054 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_2293.1_66265 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20518.t1 | 1 | 1 | AIG1 | 34 | 214 | 6.5e-22 | 77.6 | 4.4e-25 | 1.6e-21 | 76.3 |
| pfu_aug2.0_266.1_20518.t1 | 1 | 1 | MMR_HSR1 | 34 | 149 | 9.7e-06 | 25.5 | 3.9e-09 | 1.5e-05 | 24.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20518.t1 | gi|505853536|ref|XP_004620199.1| | PREDICTED: GTPase IMAP family member 4 [Sorex araneus] | 1.0e-14 |
| pfu_aug2.0_266.1_20518.t1 | gi|395541397|ref|XP_003772631.1| | PREDICTED: GTPase IMAP family member 4-like [Sarcophilus harrisii] | 1.0e-13 |
| pfu_aug2.0_266.1_20518.t1 | gi|528472603|ref|XP_005163745.1| | PREDICTED: gimap9 protein [Danio rerio] | 3.0e-13 |
| pfu_aug2.0_266.1_20518.t1 | gi|736229205|ref|XP_010782046.1| | PREDICTED: golgin subfamily A member 6-like protein 22 [Notothenia coriiceps] | 3.0e-13 |
| pfu_aug2.0_266.1_20518.t1 | gi|742250734|ref|XP_010867150.1| | PREDICTED: GTPase IMAP family member 7-like [Esox lucius] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20518.t1 atggagttagaggaatcttgtgagattgttcagaggagggccagttattatggttccaaggacaatattgcagtggatat ggatcgtacaacagtaatccgggtacttctacttgggcctcttggtgccggtaagagcgcttttggaaacgttattttag gaaagaaagagtttgtgtcaaagagaactttaagttccaaatcggttaccacgtcgctatgtcacgcccgcgttgatgtc gatgactcgattttagaggtatgcgatacaccagcattcggggaaatattacccaaatctctagcaaatgaactgaggat agggtatgacgtcgtcgctgtcattgtcccggtcaaaagattctcgaagagcgacgttgatgttttccacaagattcgaa agcaactggaaggtgtatcaaagaaacacgtgatcctggtcttgacgtttgctgacgagatggtgaactctccgtttgaa tttttgggagataacgatgatctgaggtgtttggacagtcttgttgatggtaggatcatgttgatagacaacacgtgttc tgatgaagtgacagtaaaaaggactacattcatcaccatggtaaaggacctggttaccaggaataaaggacatagataca gacttgaaccacgtaggggggtgtgtagtataggcaggatcctaaagatttgtatagtgttgtttgttgtgattgtattt gggggcgttgtctttattattaccgagtgtgtcaaaaacttgagcagaattggtacaaacatcaccaacttctgtttaaa tgtagactaa |
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Protein
| Protein ID | pfu_aug2.0_266.1_20518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20518.t1 MELEESCEIVQRRASYYGSKDNIAVDMDRTTVIRVLLLGPLGAGKSAFGNVILGKKEFVSKRTLSSKSVTTSLCHARVDV DDSILEVCDTPAFGEILPKSLANELRIGYDVVAVIVPVKRFSKSDVDVFHKIRKQLEGVSKKHVILVLTFADEMVNSPFE FLGDNDDLRCLDSLVDGRIMLIDNTCSDEVTVKRTTFITMVKDLVTRNKGHRYRLEPRRGVCSIGRILKICIVLFVVIVF GGVVFIITECVKNLSRIGTNITNFCLNVD |
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