Gene
| Gene Model ID | pfu_aug2.0_266.1_20520 |
|---|---|
| Locus | scaffold266.1 : 224017 ... 235104 : - |
| To GenomeBrowser | scaffold266.1:224017..235104 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_2293.1_66264 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| gtpase imap family member 4 | GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20520.t1 | 1 | 1 | AIG1 | 514 | 718 | 2.0e-32 | 112.0 | 1.9e-35 | 4.6e-32 | 110.8 |
| pfu_aug2.0_266.1_20520.t1 | 1 | 1 | MMR_HSR1 | 515 | 640 | 1.2e-07 | 31.6 | 1.7e-10 | 4.3e-07 | 29.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20520.t1 | gi|402865359|ref|XP_003896894.1| | PREDICTED: GTPase IMAP family member 4 [Papio anubis] | 3.0e-23 |
| pfu_aug2.0_266.1_20520.t1 | gi|8922873|ref|NP_060796.1| | GTPase IMAP family member 4 [Homo sapiens] | 6.0e-23 |
| pfu_aug2.0_266.1_20520.t1 | gi|332869927|ref|XP_003318946.1| | PREDICTED: GTPase IMAP family member 4 [Pan troglodytes] | 7.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20520.t1 atggaagatgaagaaataaacagactgcacaatgagttattgtatcagacacttgccatcgaccatttaagtcatagagt aaatgatgggataaacttcgacagattcagagccgaatgtcgcaattatctaaccgctccagttgatagagaatgtaaca gtagagaacttctggaaaaactagtagaaaaaggtcacataaaggttgggtgttatgatgtcctcaaacaacttgtcagt tttagcgcccctttaaaacgagaagtagaagacgtggagagggctataaacatgaagagaaaaagaataggcttaaaccg taatgagcccaacaaaagagaagagatgttacggatagaagcgctgattatcccaaagatggaagatgaagaaataaaca gactgcacaatgagttattgtatcagacacttgccatcaaccatctaagtcatagagtaaatgatgggataaacttcgac agattcagagccgaatgtcgcaattatctaaccgctccagtggatatagaaagtaacagtagagaacttctggaaaaact agtagaaaagggtcacataaaggttgggtgttatgatgtcctgaaacaacttgtcagttttagcgcccctttaaaacgag aagtagaagacgtggagagggctatagacatgaagagaaaaagaataggcttaaaccgtaatgagcccaacaaaagagaa gagacgttacggatagaagaattggtcatgaggattgatttttgtgaccttgttcccatggaaaatgaacagtatgaaca cgtgactcgacaaatgagtagactaaatcgtacgttgatagaaaatgcatatgaaatcacaaatgaccccgagttattta gggaatatactgacacatgtgatatatataccgaaactttagccgaatcatcaggacttttaagattattcttttatcta gaagatgaagtagctgcagcagaacagggaagcacgatactcagatatgcagaagatgcaaatgaaaagatacgacggaa tacaagtcagtttaatatttgtcaagaaaattggaaaaaccataatcgtctccttaagaaccacatcatattactaacgc gactttcaaatagaggtgcctttatcagaaaactgctttttggctctatattacttttcttgtctttcgaatccattgaa aaaatggaaaaacttatcacggaatataagatcggagccctgcaaaaagaagtacaggagatactgataactgaggattt cttaaaatactttgcactaaatgcagcgaaaattgagattacaatagatcaggaggaatcctttcgataccttgatcaac aaatacatgatgaagctcagactggtgaggacccctcaattgatattaaaatgcataaaccaactgatgaacccaaacgg aaattgttcaagaaaccgagggtcttttcagatgtgcaatcagctactccagggcctcactatgttgcggggagttccaa agctgtaatagatactgagaggaggattatactgattggtaaaataggcgctggaaagagccaatcagggaacgccattc ttggttataaatacaatgaagttttcaaagccaagaaggcgctaaaatcggtgacgtcagaagttatgtatggtacatct gtgatgaatggtaaacggtaccgtgtgtacgataccccaggggcgctgaacccagacgataaagaactgttttcagagca gctattaaagtgtatatactgtacttcaccaggatttcattgtttgacagtggtaatttcagtggcagagagaccgaata atgaagaacttcaattgtataaaaatctgaagaagtatttaggagaccgttttcaggagcacgctgttatcatatttacc aaagttgaggacaaggccgagcttgacgacatcttggctccggcggattgtccggaaattaacgagttgatacgaagctg tggtcggagatatgtttgctttggggaggataggaagggagtgaaacaagaatttgttgatcaatatcatgaaatgctcg aagaacttataagagacaatgttaggcataaaagggacttttataaacatcctttgtatgataaagcacaggacttcata gcgaaagatgcaaaagaaattaggaaaaaagacagtaccatctcagaaagtcaagcattagagctggcaagggagagagc tatcaatggagaatcagattgcaatgccgatatgaaaaaggaaatcaagaggtggtgtccttgtacgattctttaa |
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Protein
| Protein ID | pfu_aug2.0_266.1_20520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20520.t1 MEDEEINRLHNELLYQTLAIDHLSHRVNDGINFDRFRAECRNYLTAPVDRECNSRELLEKLVEKGHIKVGCYDVLKQLVS FSAPLKREVEDVERAINMKRKRIGLNRNEPNKREEMLRIEALIIPKMEDEEINRLHNELLYQTLAINHLSHRVNDGINFD RFRAECRNYLTAPVDIESNSRELLEKLVEKGHIKVGCYDVLKQLVSFSAPLKREVEDVERAIDMKRKRIGLNRNEPNKRE ETLRIEELVMRIDFCDLVPMENEQYEHVTRQMSRLNRTLIENAYEITNDPELFREYTDTCDIYTETLAESSGLLRLFFYL EDEVAAAEQGSTILRYAEDANEKIRRNTSQFNICQENWKNHNRLLKNHIILLTRLSNRGAFIRKLLFGSILLFLSFESIE KMEKLITEYKIGALQKEVQEILITEDFLKYFALNAAKIEITIDQEESFRYLDQQIHDEAQTGEDPSIDIKMHKPTDEPKR KLFKKPRVFSDVQSATPGPHYVAGSSKAVIDTERRIILIGKIGAGKSQSGNAILGYKYNEVFKAKKALKSVTSEVMYGTS VMNGKRYRVYDTPGALNPDDKELFSEQLLKCIYCTSPGFHCLTVVISVAERPNNEELQLYKNLKKYLGDRFQEHAVIIFT KVEDKAELDDILAPADCPEINELIRSCGRRYVCFGEDRKGVKQEFVDQYHEMLEELIRDNVRHKRDFYKHPLYDKAQDFI AKDAKEIRKKDSTISESQALELARERAINGESDCNADMKKEIKRWCPCTIL |
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