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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_266.1_20524
Locus scaffold266.1 : 296041 ... 303384 : -
To GenomeBrowser scaffold266.1:296041..303384
Genes list of scaffold scaffold266.1
Synonym pfu_aug1.0_15431.1_61491

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_266.1_20524.t1 gi|641758069|ref|XP_008165093.1| PREDICTED: caspase-8-like isoform X2 [Chrysemys picta bellii] 3.0e-10
pfu_aug2.0_266.1_20524.t1 gi|530639022|ref|XP_005306310.1| PREDICTED: caspase-8-like isoform X1 [Chrysemys picta bellii] 4.0e-10
pfu_aug2.0_266.1_20524.t1 gi|612046082|ref|XP_007501565.1| PREDICTED: caspase-18 isoform X2 [Monodelphis domestica] 6.0e-10
pfu_aug2.0_266.1_20524.t1 gi|612046080|ref|XP_007501564.1| PREDICTED: caspase-18 isoform X1 [Monodelphis domestica] 7.0e-10

Transcript
Transcript IDpfu_aug2.0_266.1_20524.t1
Definition-
>pfu_aug2.0_266.1_20524.t1
atgttcccggcgattaaaactaccacacggacaagcgatcagaaaggtagatctcgacagacgaacgcgaagccctctcg
cgtgacgaatttgaacttaaaaattagagccatcgacgaaaatggcgacgaaataagtatacggagcgatgacgaacaaa
gaagcgatatttctgaccccagaatgaagaggaaggtgaccacgaccgttagaaacggacccaagaagaaggcaccgccc
tccaggaacaaacgacctacagactatatagagctaaccggatcaccggagctcatcaggcagtttgaggtgaaaagaga
catgtccgtgtacggctcattttcccgccatatgttggcgtcaaaagaagattccatccctcccactccagcgtcagatc
ccccacggaccagacagaaaaagccccctctaggtttccgccttcctcccgccgttaaagcagctccttctatcaagtta
gatgatccttatttggaagattataacgtaacgaaagcccttgtactgatatttaatcagcaaacattccagagaaacgg
agagttgttgatgtctctcaaacgacaatatgccttacaggacggagccgagttaaagaaacttttcgatgaaatggagt
atacaacaaaactgcataccgatttgaaagcagacgacatcgcccacgaaatttacaaagtagtgacgtcagatgaagaa
aatggtgattacccaggaacttatgacgcattcatatgttgtataggttcccatggcaacagtgaacgatttttaggtca
tgattgccgtccaatagatgttgcaccgatgctggaagcgctcagttcagaggattgtgttcgatttgctacaaagccaa
agcttttctttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntaaatgtcactggaaattccatctacc
tgaaaagcctgatcaagatatctcactgcctcctcagcacttcctcgtcagttattcccctttgggtgcgtccaagaagt
acagaacccataagacagctctgaactccagaaatgccaaaaccggaagccagtacttccaaacatttgtcaacgtcttc
agaaggactcatgcatctgtccctttggatgaaatcatacatcagatgaacaaggaaatctcccacacctttgttcctgg
tcaagatggtgtccacaggaaattcgacaaggaaccaatcacagatcacaatctcggcttcagaaatgtttacttcaaaa
ccaaaaaattccttcgatattag

Protein
Protein IDpfu_aug2.0_266.1_20524.t1
Definition-
>pfu_aug2.0_266.1_20524.t1
MFPAIKTTTRTSDQKGRSRQTNAKPSRVTNLNLKIRAIDENGDEISIRSDDEQRSDISDPRMKRKVTTTVRNGPKKKAPP
SRNKRPTDYIELTGSPELIRQFEVKRDMSVYGSFSRHMLASKEDSIPPTPASDPPRTRQKKPPLGFRLPPAVKAAPSIKL
DDPYLEDYNVTKALVLIFNQQTFQRNGELLMSLKRQYALQDGAELKKLFDEMEYTTKLHTDLKADDIAHEIYKVVTSDEE
NGDYPGTYDAFICCIGSHGNSERFLGHDCRPIDVAPMLEALSSEDCVRFATKPKLFFXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXKCHWKFHLPEKPDQDISLPPQHFLVSYSPLGASKKYRTHKTALNSRNAKTGSQYFQTFVNVF
RRTHASVPLDEIIHQMNKEISHTFVPGQDGVHRKFDKEPITDHNLGFRNVYFKTKKFLRY

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