Gene
| Gene Model ID | pfu_aug2.0_266.1_20526 |
|---|---|
| Locus | scaffold266.1 : 319084 ... 338184 : - |
| To GenomeBrowser | scaffold266.1:319084..338184 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_12295.1_03220 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20526.t1 | 1 | 1 | Fibrinogen_C | 89 | 265 | 1.2e-28 | 100.3 | 3.1e-32 | 1.5e-28 | 99.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20526.t1 | gi|657566014|ref|XP_008286332.1| | PREDICTED: fibrinogen-like protein 1 [Stegastes partitus] | 3.0e-23 |
| pfu_aug2.0_266.1_20526.t1 | gi|557329642|ref|XP_006037723.1| | PREDICTED: angiopoietin-related protein 7-like [Alligator sinensis] | 5.0e-22 |
| pfu_aug2.0_266.1_20526.t1 | gi|505858629|ref|XP_004622708.1| | PREDICTED: protein scabrous-like [Sorex araneus] | 6.0e-22 |
| pfu_aug2.0_266.1_20526.t1 | gi|527256515|ref|XP_005146530.1| | PREDICTED: angiopoietin-related protein 7-like [Melopsittacus undulatus] | 7.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20526.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20526.t1 atggatgtttgcaattcttctactggcacaacagttttgaaactcgtctaccagactgttaattgtgataccacaagtac accgtctgagagtacatcacagagcgtgctaacaactctttattctactgtacagagcacagaaacaactgctgcttcga ctacacaaaacatacaaacaacgacatcaccttgtggagtagctggtactatggtcagtggagtgtgtcagtgtgagaga gggtgttctggtacatattgtgacaattgttacacagattgcagtgaaggtaatggaatatactcaggagtagttgatgc atttataaaaccgaccgggattcttaatccggtaaaagttctgtgcaattttgattattccgtaacttatatacagtata gaaaaaatggtgacgtgaatttcaacagaagttggagtgagtacgaaaatggctttggagatgtcaacggagatttctgg ttggggaacaaatatattcgtgccttggcacaacagaagaactactttttaggtttaaggcagtatacttcttcatggag tataagcagttacccaagtctggcaatagatagtgctacaaatttttacgcattgacatatggatctctgatttctggaa ccgacggattgtcaccggcggatacatcaaaggaggcgtatgggcaacaatttagtacgtacgatcgtgatcctacaggt tgtgccaagttacatggcagcggatggtggtataacacgggatgctctttgtcaaatcttaatggtaacttccaggttac tttcggatccacgactggaatcacacagaccggcattggaatttatacatag |
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Protein
| Protein ID | pfu_aug2.0_266.1_20526.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20526.t1 MDVCNSSTGTTVLKLVYQTVNCDTTSTPSESTSQSVLTTLYSTVQSTETTAASTTQNIQTTTSPCGVAGTMVSGVCQCER GCSGTYCDNCYTDCSEGNGIYSGVVDAFIKPTGILNPVKVLCNFDYSVTYIQYRKNGDVNFNRSWSEYENGFGDVNGDFW LGNKYIRALAQQKNYFLGLRQYTSSWSISSYPSLAIDSATNFYALTYGSLISGTDGLSPADTSKEAYGQQFSTYDRDPTG CAKLHGSGWWYNTGCSLSNLNGNFQVTFGSTTGITQTGIGIYT |
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