Gene
| Gene Model ID | pfu_aug2.0_266.1_20528 |
|---|---|
| Locus | scaffold266.1 : 386407 ... 410295 : - |
| To GenomeBrowser | scaffold266.1:386407..410295 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_4428.1_01725 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rap guanine nucleotide exchange factor 4- partial | GO:0005088 GO:0005829 GO:0005886 GO:0005952 GO:0006112 GO:0007186 GO:0008603 GO:0017016 GO:0017156 GO:0017157 GO:0019933 GO:0030168 GO:0030552 GO:0043547 GO:0044281 GO:0045859 GO:0050796 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20528.t4 | 1 | 1 | DEP | 199 | 267 | 1.6e-22 | 78.9 | 4.6e-26 | 3.4e-22 | 77.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20528.t4 | gi|676496085|ref|XP_009067099.1| | hypothetical protein LOTGIDRAFT_135052, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_266.1_20528.t4 | gi|585695958|ref|XP_006822120.1| | PREDICTED: rap guanine nucleotide exchange factor 4-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_266.1_20528.t4 | gi|677973646|ref|XP_009071929.1| | PREDICTED: rap guanine nucleotide exchange factor 4-like, partial [Acanthisitta chloris] | 0.0 |
| pfu_aug2.0_266.1_20528.t4 | gi|705675227|ref|XP_010116584.1| | PREDICTED: rap guanine nucleotide exchange factor 4-like, partial [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_266.1_20528.t4 | gi|62988799|gb|AAY24186.1| | unknown [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20528.t1 atgcagcacttgattcagtccactatatcctgcagtttttctaccttgaccttagcacaggtcagcgaagatgacatgct ttctctacatttggtcaaaagaccacaggacagaactcttgaggacttggagattatctatgaggagctattacacatca aggctttatctcacctgtcaaccagcgtcaagagggaactggccagcgtactggtgtttgaatctcacgccaaggccggt acagtcttatttaatcaaggagacgaagggaagtcgtggtatatcatactgaaaggatctgtgaacgtggtcatttatgg gaagggcgtggtatgtacattacatgaaggagacgattttggaaaactggcattactcaacgatgcgccaagggcggcta ccattgttctaagggaagacaactgtcatttcttgagggtggacaaggaagatttcaacagaattctaagggatgtggaa gcaaacactgtgaggttaaaggagcatggtaaggatgtattagtactagagaagatagccaccaatgtacccggtcctga cggaactatgcaactacattataagtattcggtgatggcaggtaccccagagaagatgttggaacatctactggaaaccg ccctcgacaacaacaaaagtggtgaacactctaatgtacctgatcactttttggaggattttcttttaacccatgtgata ttcatgcccaacgactcgctgtgcccttccctactcacacattatcatgcaaaatcaatcaaaaacgatgatgatgagag tacagagtacgccatgagccataaacatagagtggtgaggtttgtacaggagtggtacaggctggctgaagatacattca tggaggataaagccgtacatgatttcttagaggaactacgagacgtggtagaagatgagtgtaacatatacccctcactc agatctgacttagcagatatagaggctatattaaagaactatcgtcttaacgtttgcctggttccagaaggtctatgcat atcagcccatgtatcgataataactctagatttattggatccattcagtatagtgaaggtatactgtgctgatcatacgt acaccacactaagggttcccatggataccccagtacaatctatcatcgacatgtgtcgagaaaagttagggctaggagag gaggaactggtgctttgtgaaatcaagtcatcaggggacaaaagtacatacagacttgatgatctgtgtataactacagg actcagtctgaatggattactcttcatatcaccaagaaaacacacagatgctttgacaccacatccctcacaagaagggc cagcattggggacctcaaatcaacttgacctgatgagtactaaggaggtggcatatcatatgactactcatgactgggag ttattcacatgtgttatagagcaagagttgatataccttgtcatgggcagacatcagtttggtgctattacggcaaattt ggacatattcctacgccgattcaatgaaattcaatactgggttgtgacagagatgatgctagctcaaaatgtgggcaaac gagtgcaacttctcagaaaatttatcaaaatagcagctcattgtaaagaatatcaaaacctacattccttctttgccata gtaatgggactgagtaacatagcagttagtaggctttctcagacttgggagaaacttcctagcaagtttaagaagatgtt tgctgactttgagacattaatggacccatccaggaaccatcgtgtttacagactgtttgtagctaagcttactcccccta tcattccgtttatgcctttacttatgaaggatttaacattcacacatgatgggaacaaaacatacttcgatggacttgtc aattttgaaaaaatgcacatgatcgctcagacacttagaacagtcaaattctgtagaggaagaagacttgaactagaacc tcccagtaccatcaaatcaaactcagacatagaggattatataagatatgaaaatcttaaaatcatagacaatcagagac tattgacgcagctttcatataagttagaacccagaagaacatag |
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| Transcript ID | pfu_aug2.0_266.1_20528.t2 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t2 atgaagaccaggagtaaaaagtctcagcctcaatcaaacattggccgaatctcaagtttccgggaccttcgtaaaacttt aaaaccgaggcgtaagttgggctctagctccgatggcaagactctgtcgacagtgttaaagtcgcaactacctcaactta tacaaacagatacaatcaagttcaataaaggtacccctgtgtccagaaaacgacggtctcttacccatgatccgtccgta cgacgggaacttgtggtgacatctgacgacaaggggaggttactctgtttgggttatcctatatatgagttagatggaag agacctgggtataaatatttgtgtgtattctttgcagaggaacaagaaactattggaagaagttattacacctcttgaat ccttgacaaatgcagcccttcacggtaagcgagtaccatcacccaaggcccgtcgttccagcagccgtctgtccaatgct agctgtaacagtacgcagatcaactcactggcgcccatcaccacgatgccgtcagagaaattggcgcgggctggtgaagt gttacggaccgttctattggccagagcacctcacatgatcagagaccggaagtaccatctcagaacataccgacggtgca tggttggaacggaaatggttgattggctattacagcagagtccactggtacattcccggaatcaggcagtgggtatctgg caggcgctatgtgaggaggggatcgtagttcatgtatgtagagaacatcagttcaaagacaagtacctgttctacagatt ctgtgaggatgaccagggtgtgggcactaccccctccccagccgataagaaggattgtgaggaggagctacaagacgtgc tcctgaccttggcccagataggacccgatgccatgatgagaatgatcctccggaaactaccacaggacagaactcttgag gacttggagattatctatgaggagctattacacatcaaggctttatctcacctgtcaaccagcgtcaagagggaactggc cagcgtactggtgtttgaatctcacgccaaggccggtacagtcttatttaatcaaggagacgaagggaagtcgtggtata tcatactgaaaggatctgtgaacgtggtcatttatgggaagggcgtggtatgtacattacatgaaggagacgattttgga aaactggcattactcaacgatgcgccaagggcggctaccattgttctaagggaagacaactgtcatttcttgagggtgga caaggaagatttcaacagaattctaagggatgtggaagcaaacactgtgaggttaaaggagcatggtaaggatgtattag tactagagaagatagccaccaatgtacccggtcctgacggaactatgcaactacattataagtattcggtgatggcaggt accccagagaagatgttggaacatctactggaaaccgccctcgacaacaacaaaagtggtgaacactctaatgtacctga tcactttttggaggattttcttttaacccatgtgatattcatgcccaacgactcgctgtgcccttccctactcacacatt atcatgcaaaatcaatcaaaaacgatgatgatgagagtacagagtacgccatgagccataaacatagagtggtgaggttt gtacaggagtggtacaggctggctgaagatacattcatggaggataaagccgtacatgatttcttagaggaactacgaga cgtggtagaagatgagtgtaacatatacccctcactcagatctgacttagcagatatagaggctatattaaagaactatc gtcttaacgtttgcctggttccagaaggtctatgcatatcagcccatgtatcgataataactctagatttattggatcca ttcagtatagtgaaggtatactgtgctgatcatacgtacaccacactaagggttcccatggataccccagtacaatctat catcgacatgtgtcgagaaaagttagggctaggagaggaggaactggtgctttgtgaaatcaagtcatcaggggacaaaa gtacatacagacttgatgatctgtgtataactacaggactcagtctgaatggattactcttcatatcaccaagaaaacac acagatgctttgacaccacatccctcacaagaagggccagcattggggacctcaaatcaacttgacctgatgagtactaa ggaggtggcatatcatatgactactcatgactgggagttattcacatgtgttatagagcaagagttgatataccttgtca tgggcagacatcagtttggtgctattacggcaaatttggacatattcctacgccgattcaatgaaattcaatactgggtt gtgacagagatgatgctagctcaaaatgtgggcaaacgagtgcaacttctcagaaaatttatcaaaatagcagctcattg taaagaatatcaaaacctacattccttctttgccatagtaatgggactgagtaacatagcagttagtaggctttctcaga cttgggagaaacttcctagcaagtttaagaagatgtttgctgactttgagacattaatggacccatccaggaaccatcgt gtttacagactgtttgtagctaagcttactccccctatcattccgtttatgcctttacttatgaaggatttaacattcac acatgatgggaacaaaacatacttcgatggacttgtcaattttgaaaaaatgcacatgatcgctcagacacttagaacag tcaaattctgtagaggaagaagacttgaactagaacctcccagtaccatcaaatcaaactcagacatagaggattatata agatatgaaaatcttaaaatcatagacaatcagagactattgacgcagctttcatataagttagaacccagaagaacata g |
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| Transcript ID | pfu_aug2.0_266.1_20528.t3 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t3 atgccgtcagagaaattggcgcgggctggtgaagtgttacggaccgttctattggccagagcacctcacatgatcagaga ccggaagtaccatctcagaacataccgacggtgcatggttggaacggaaatggttgattggctattacagcagagtccac tggtacattcccggaatcaggcagtgggtatctggcaggcgctatgtgaggaggggatcgtagttcatgtatgtagagaa catcagttcaaagacaagtacctgttctacagattctgtgaggatgaccagggtgtgggcactaccccctccccagccga taagaaggattgtgaggaggagctacaagacgtgctcctgaccttggcccagataggacccgatgccatgatgagaatga tcctccggaaactaaatttgaaggattttgatgaaagaatgcagcacttgattcagtccactatatcctgcagtttttct accttgaccttagcacaggtcagcgaagatgacatgctttctctacatttggtcaaaagaccacaggacagaactcttga ggacttggagattatctatgaggagctattacacatcaaggctttatctcacctgtcaaccagcgtcaagagggaactgg ccagcgtactggtgtttgaatctcacgccaaggccggtacagtcttatttaatcaaggagacgaagggaagtcgtggtat atcatactgaaaggatctgtgaacgtggtcatttatgggaagggcgtggtatgtacattacatgaaggagacgattttgg aaaactggcattactcaacgatgcgccaagggcggctaccattgttctaagggaagacaactgtcatttcttgagggtgg acaaggaagatttcaacagaattctaagggatgtggaagcaaacactgtgaggttaaaggagcatggtaaggatgtatta gtactagagaagatagccaccaatgtacccggtcctgacggaactatgcaactacattataagtattcggtgatggcagg taccccagagaagatgttggaacatctactggaaaccgccctcgacaacaacaaaagtggtgaacactctaatgtacctg atcactttttggaggattttcttttaacccatgtgatattcatgcccaacgactcgctgtgcccttccctactcacacat tatcatgcaaaatcaatcaaaaacgatgatgatgagagtacagagtacgccatgagccataaacatagagtggtgaggtt tgtacaggagtggtacaggctggctgaagatacattcatggaggataaagccgtacatgatttcttagaggaactacgag acgtggtagaagatgagtgtaacatatacccctcactcagatctgacttagcagatatagaggctatattaaagaactat cgtcttaacgtttgcctggttccagaaggtctatgcatatcagcccatgtatcgataataactctagatttattggatcc attcagtatagtgaaggtatactgtgctgatcatacgtacaccacactaagggttcccatggataccccagtacaatcta tcatcgacatgtgtcgagaaaagttagggctaggagaggaggaactggtgctttgtgaaatcaagtcatcaggggacaaa agtacatacagacttgatgatctgtgtataactacaggactcagtctgaatggattactcttcatatcaccaagaaaaca cacagatgctttgacaccacatccctcacaagaagggccagcattggggacctcaaatcaacttgacctgatgagtacta aggaggtggcatatcatatgactactcatgactgggagttattcacatgtgttatagagcaagagttgatataccttgtc atgggcagacatcagtttggtgctattacggcaaatttggacatattcctacgccgattcaatgaaattcaatactgggt tgtgacagagatgatgctagctcaaaatgtgggcaaacgagtgcaacttctcagaaaatttatcaaaatagcagctcatt gtaaagaatatcaaaacctacattccttctttgccatagtaatgggactgagtaacatagcagttagtaggctttctcag acttgggagaaacttcctagcaagtttaagaagatgtttgctgactttgagacattaatggacccatccaggaaccatcg tgtttacagactgtttgtagctaagcttactccccctatcattccgtttatgcctttacttatgaaggatttaacattca cacatgatgggaacaaaacatacttcgatggacttgtcaattttgaaaaaatgcacatgatcgctcagacacttagaaca gtcaaattctgtagaggaagaagacttgaactagaacctcccagtaccatcaaatcaaactcagacatagaggattatat aagatatgaaaatcttaaaatcatagacaatcagagactattgacgcagctttcatataagttagaacccagaagaacat ag |
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| Transcript ID | pfu_aug2.0_266.1_20528.t4 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t4 atgaagaccaggagtaaaaagtctcagcctcaatcaaacattggccgaatctcaagtttccgggaccttcgtaaaacttt aaaaccgaggcgtaagttgggctctagctccgatggcaagactctgtcgacagtgttaaagtcgcaactacctcaactta tacaaacagatacaatcaagttcaataaaggtacccctgtgtccagaaaacgacggtctcttacccatgatccgtccgta cgacgggaacttgtggtgacatctgacgacaaggggaggttactctgtttgggttatcctatatatgagttagatggaag agacctgggtataaatatttgtgtgtattctttgcagaggaacaagaaactattggaagaagttattacacctcttgaat ccttgacaaatgcagcccttcacggtaagcgagtaccatcacccaaggcccgtcgttccagcagccgtctgtccaatgct agctgtaacagtacgcagatcaactcactggcgcccatcaccacgatgccgtcagagaaattggcgcgggctggtgaagt gttacggaccgttctattggccagagcacctcacatgatcagagaccggaagtaccatctcagaacataccgacggtgca tggttggaacggaaatggttgattggctattacagcagagtccactggtacattcccggaatcaggcagtgggtatctgg caggcgctatgtgaggaggggatcgtagttcatgtatgtagagaacatcagttcaaagacaagtacctgttctacagatt ctgtgaggatgaccagggtgtgggcactaccccctccccagccgataagaaggattgtgaggaggagctacaagacgtgc tcctgaccttggcccagataggacccgatgccatgatgagaatgatcctccggaaacttgtaaataaaattttaacgaga aagatacgttctttatggagatcctacaagaacacagccattgacatttggcgtacggcgatagcgccatag |
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Protein
| Protein ID | pfu_aug2.0_266.1_20528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20528.t1 MQHLIQSTISCSFSTLTLAQVSEDDMLSLHLVKRPQDRTLEDLEIIYEELLHIKALSHLSTSVKRELASVLVFESHAKAG TVLFNQGDEGKSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALLNDAPRAATIVLREDNCHFLRVDKEDFNRILRDVE ANTVRLKEHGKDVLVLEKIATNVPGPDGTMQLHYKYSVMAGTPEKMLEHLLETALDNNKSGEHSNVPDHFLEDFLLTHVI FMPNDSLCPSLLTHYHAKSIKNDDDESTEYAMSHKHRVVRFVQEWYRLAEDTFMEDKAVHDFLEELRDVVEDECNIYPSL RSDLADIEAILKNYRLNVCLVPEGLCISAHVSIITLDLLDPFSIVKVYCADHTYTTLRVPMDTPVQSIIDMCREKLGLGE EELVLCEIKSSGDKSTYRLDDLCITTGLSLNGLLFISPRKHTDALTPHPSQEGPALGTSNQLDLMSTKEVAYHMTTHDWE LFTCVIEQELIYLVMGRHQFGAITANLDIFLRRFNEIQYWVVTEMMLAQNVGKRVQLLRKFIKIAAHCKEYQNLHSFFAI VMGLSNIAVSRLSQTWEKLPSKFKKMFADFETLMDPSRNHRVYRLFVAKLTPPIIPFMPLLMKDLTFTHDGNKTYFDGLV NFEKMHMIAQTLRTVKFCRGRRLELEPPSTIKSNSDIEDYIRYENLKIIDNQRLLTQLSYKLEPRRT |
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| Protein ID | pfu_aug2.0_266.1_20528.t2 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t2 MKTRSKKSQPQSNIGRISSFRDLRKTLKPRRKLGSSSDGKTLSTVLKSQLPQLIQTDTIKFNKGTPVSRKRRSLTHDPSV RRELVVTSDDKGRLLCLGYPIYELDGRDLGINICVYSLQRNKKLLEEVITPLESLTNAALHGKRVPSPKARRSSSRLSNA SCNSTQINSLAPITTMPSEKLARAGEVLRTVLLARAPHMIRDRKYHLRTYRRCMVGTEMVDWLLQQSPLVHSRNQAVGIW QALCEEGIVVHVCREHQFKDKYLFYRFCEDDQGVGTTPSPADKKDCEEELQDVLLTLAQIGPDAMMRMILRKLPQDRTLE DLEIIYEELLHIKALSHLSTSVKRELASVLVFESHAKAGTVLFNQGDEGKSWYIILKGSVNVVIYGKGVVCTLHEGDDFG KLALLNDAPRAATIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHGKDVLVLEKIATNVPGPDGTMQLHYKYSVMAG TPEKMLEHLLETALDNNKSGEHSNVPDHFLEDFLLTHVIFMPNDSLCPSLLTHYHAKSIKNDDDESTEYAMSHKHRVVRF VQEWYRLAEDTFMEDKAVHDFLEELRDVVEDECNIYPSLRSDLADIEAILKNYRLNVCLVPEGLCISAHVSIITLDLLDP FSIVKVYCADHTYTTLRVPMDTPVQSIIDMCREKLGLGEEELVLCEIKSSGDKSTYRLDDLCITTGLSLNGLLFISPRKH TDALTPHPSQEGPALGTSNQLDLMSTKEVAYHMTTHDWELFTCVIEQELIYLVMGRHQFGAITANLDIFLRRFNEIQYWV VTEMMLAQNVGKRVQLLRKFIKIAAHCKEYQNLHSFFAIVMGLSNIAVSRLSQTWEKLPSKFKKMFADFETLMDPSRNHR VYRLFVAKLTPPIIPFMPLLMKDLTFTHDGNKTYFDGLVNFEKMHMIAQTLRTVKFCRGRRLELEPPSTIKSNSDIEDYI RYENLKIIDNQRLLTQLSYKLEPRRT |
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| Protein ID | pfu_aug2.0_266.1_20528.t3 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t3 MPSEKLARAGEVLRTVLLARAPHMIRDRKYHLRTYRRCMVGTEMVDWLLQQSPLVHSRNQAVGIWQALCEEGIVVHVCRE HQFKDKYLFYRFCEDDQGVGTTPSPADKKDCEEELQDVLLTLAQIGPDAMMRMILRKLNLKDFDERMQHLIQSTISCSFS TLTLAQVSEDDMLSLHLVKRPQDRTLEDLEIIYEELLHIKALSHLSTSVKRELASVLVFESHAKAGTVLFNQGDEGKSWY IILKGSVNVVIYGKGVVCTLHEGDDFGKLALLNDAPRAATIVLREDNCHFLRVDKEDFNRILRDVEANTVRLKEHGKDVL VLEKIATNVPGPDGTMQLHYKYSVMAGTPEKMLEHLLETALDNNKSGEHSNVPDHFLEDFLLTHVIFMPNDSLCPSLLTH YHAKSIKNDDDESTEYAMSHKHRVVRFVQEWYRLAEDTFMEDKAVHDFLEELRDVVEDECNIYPSLRSDLADIEAILKNY RLNVCLVPEGLCISAHVSIITLDLLDPFSIVKVYCADHTYTTLRVPMDTPVQSIIDMCREKLGLGEEELVLCEIKSSGDK STYRLDDLCITTGLSLNGLLFISPRKHTDALTPHPSQEGPALGTSNQLDLMSTKEVAYHMTTHDWELFTCVIEQELIYLV MGRHQFGAITANLDIFLRRFNEIQYWVVTEMMLAQNVGKRVQLLRKFIKIAAHCKEYQNLHSFFAIVMGLSNIAVSRLSQ TWEKLPSKFKKMFADFETLMDPSRNHRVYRLFVAKLTPPIIPFMPLLMKDLTFTHDGNKTYFDGLVNFEKMHMIAQTLRT VKFCRGRRLELEPPSTIKSNSDIEDYIRYENLKIIDNQRLLTQLSYKLEPRRT |
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| Protein ID | pfu_aug2.0_266.1_20528.t4 |
| Definition | - |
>pfu_aug2.0_266.1_20528.t4 MKTRSKKSQPQSNIGRISSFRDLRKTLKPRRKLGSSSDGKTLSTVLKSQLPQLIQTDTIKFNKGTPVSRKRRSLTHDPSV RRELVVTSDDKGRLLCLGYPIYELDGRDLGINICVYSLQRNKKLLEEVITPLESLTNAALHGKRVPSPKARRSSSRLSNA SCNSTQINSLAPITTMPSEKLARAGEVLRTVLLARAPHMIRDRKYHLRTYRRCMVGTEMVDWLLQQSPLVHSRNQAVGIW QALCEEGIVVHVCREHQFKDKYLFYRFCEDDQGVGTTPSPADKKDCEEELQDVLLTLAQIGPDAMMRMILRKLVNKILTR KIRSLWRSYKNTAIDIWRTAIAP |
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