Gene
| Gene Model ID | pfu_aug2.0_266.1_20533 |
|---|---|
| Locus | scaffold266.1 : 478216 ... 482835 : - |
| To GenomeBrowser | scaffold266.1:478216..482835 |
| Genes list of scaffold | scaffold266.1 |
| Synonym | pfu_aug1.0_2070.1_44224 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| apoptogenic protein mitochondrial | GO:0005739 GO:0034393 GO:0043280 GO:0090200 GO:0097193 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_266.1_20533.t1 | 1 | 1 | DUF2315 | 129 | 248 | 1.5e-30 | 105.6 | 1.5e-34 | 2.2e-30 | 105.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_266.1_20533.t1 | gi|524890332|ref|XP_005101713.1| | PREDICTED: apoptogenic protein 1, mitochondrial-like [Aplysia californica] | 4.0e-31 |
| pfu_aug2.0_266.1_20533.t1 | gi|683895191|ref|XP_009099963.1| | PREDICTED: apoptogenic protein 1, mitochondrial [Serinus canaria] | 4.0e-25 |
| pfu_aug2.0_266.1_20533.t1 | gi|641733308|ref|XP_008157067.1| | PREDICTED: apoptogenic protein 1, mitochondrial [Eptesicus fuscus] | 6.0e-25 |
| pfu_aug2.0_266.1_20533.t1 | gi|634858647|ref|XP_007942809.1| | PREDICTED: apoptogenic protein 1, mitochondrial [Orycteropus afer afer] | 6.0e-25 |
| pfu_aug2.0_266.1_20533.t1 | gi|148686670|gb|EDL18617.1| | RIKEN cDNA 2810002N01, isoform CRA_a [Mus musculus] | 8.0e-25 |
Transcript
| Transcript ID | pfu_aug2.0_266.1_20533.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20533.t1 atgagtcttgtgttccgctgtgttcagcacagagaagtcttggcgagatctcctcttcatcattgtgtatataaacggac tgtgagtcttgtgttccgctttgttcagcgcagagaagtcttggcgagatctcctccacattattgtgtatataaacggg ctgtgagtcttgtgttccgctgtgttcagcgcagcgaagtcttgtcgagatctcctctacattattgtgtatataaacgg gccgtgagtcatgtgttccgctgtgttcagcgcagggaagtctgttcgagatctcctccacattattgtgtatataaacg ggctaaacaagaaaaacaaaaggctgatattcatatctacaacgagccacccaaaaatgtgtcagcagacatgattggtc cggctcatccggagtccaacatccgggcaatcaaattacacataccagataatgaatcagccaatcacaaacgttataga gagatgagacaagaagcgcatcagtggaaccatctattttgggcaaaacacaacagaacctttttccagcaaaaagagga atatgttaaaatgaaactagctgagaagaaacaaaagtatggaccagatgctgatcaaacactcacaccagaggaactgt ccgagttttaccagcggttccttaacgagaactactccgcacataaacagtataataggtcaatattttactctacattc tgctttatttacttgataactaatatgtctagtcttcaaattatataa |
|
Protein
| Protein ID | pfu_aug2.0_266.1_20533.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_266.1_20533.t1 MSLVFRCVQHREVLARSPLHHCVYKRTVSLVFRFVQRREVLARSPPHYCVYKRAVSLVFRCVQRSEVLSRSPLHYCVYKR AVSHVFRCVQRREVCSRSPPHYCVYKRAKQEKQKADIHIYNEPPKNVSADMIGPAHPESNIRAIKLHIPDNESANHKRYR EMRQEAHQWNHLFWAKHNRTFFQQKEEYVKMKLAEKKQKYGPDADQTLTPEELSEFYQRFLNENYSAHKQYNRSIFYSTF CFIYLITNMSSLQII |
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