Gene
| Gene Model ID | pfu_aug2.0_267.1_23768 |
|---|---|
| Locus | scaffold267.1 : 1845 ... 17735 : - |
| To GenomeBrowser | scaffold267.1:1845..17735 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_2307.1_22945 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-a-like isoform 1 | GO:0008234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23768.t1 | 1 | 1 | Peptidase_C2 | 22 | 325 | 0.0 | 336.3 | 0.0 | 0.0 | 335.8 |
| pfu_aug2.0_267.1_23768.t1 | 1 | 1 | Calpain_III | 341 | 488 | 1.10001e-40 | 138.6 | 1.09301e-43 | 2.29999e-40 | 137.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23768.t1 | gi|676490672|ref|XP_009065346.1| | hypothetical protein LOTGIDRAFT_108350 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_267.1_23768.t1 | gi|759048529|ref|XP_011333308.1| | PREDICTED: calpain-B-like isoform X8 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23768.t1 atgtcgtcggccaggaggaaggattttcaaagtctcaaggccgaattattgcaaaacaactctctattcattgacgagga ttttccacccgacaatagatccctgacgttcagtggtcagcaaccgtccggactccggaaagtggtgtggagacggccaa aggatattgcaaggaaccctaaattcattgtcagaaacgccacaaggttcgacctcgatcaaggatatttagggaattgt tggttcatagccggtgcttcgttattggcgacaaagaagaaattattacagagatgtgttccacacgatcaagaatttga ccacaactacgcaggtatatttcgttttaacttttggtggtacggtaaatggacggaggttgttgtagatgactacctac ccacggacggataccgccttatatatgccagaaatagggaggagccggacgaattctgggcagctctgtttgaaaaggca tatgctaaactacgaggttgttatgagggtttggatggcggcaagctacaagattccttagtggacatgacagggggcat ctcagaagacatagacatcaaggacaagtcacagataccacccaatgtatttgacgtcatgtggaaaaccaacgatctaa attccttccttggctgcagtattgccctcccccagaatgcttccagatcagaagtggagcttgcaaacggactgtacatg ggccatgcatatagtataactgccctagcagtggtaccatatcaaggcagatctgtgcagttgtgtcgtttgagaaatcc ttggggacggggcgaatggaaaggtgaatggtctgacaattcacctcagatgagaagtttatcaccagagatgaagaaac agctaggagtcgtcatacgcgatgaaggagaattctggatgccagcacaggacttgctttctaactttgaggaaattcag tttatccacttaacaccggatgcacttacatcagaactggctaacaacgagaggaaacagcagtggacggtgacggttta ccatgatgcttggatacgaggtcttacggcgggtgggtgtgggaacgctccttaccaagatttatattggaaaaaccctc aattctcgataacattgacggatccagatgaaaatgacaacagggggcagtgcactattatagttagtcttatggagaag gaaaagaacaacaaatcagagatagctataggttttgatatttacaagcttaaaaacccacaaaatcgacccttagacgt tgaatcagctccaaggaatgcccttattttgaaaaaaagaggaggaatatatcagtataaccgagaggtaaccaaaaggt tcgagctgccacctggaagctacgtcatcataccaagttcattcaaaccacacgaggaggcagaatttatgctaagaatg ttcacagaaaaagctgccacaagcagtgtactggacgaaacctctgggccatcatcgcctgtgataagacctacagaccc cattaaagatttattcgccaagcatgcaggagaattaggaaaactacatgcaagggaattgaagcggtttctccatgact tatctgcactcgagttgaaagagccaatgaaatttagtatggaagcatgtagaagccttattactgtaatggatagtcat aaaaccgggacactgacatttggtgacgcacagttggcatggaaactcattttgaaacaaaagactgtatttgatcaatt tgattttgacaaatcggggaacgtagatacgtatgaactcagcaaaatgttcggttctttaggttttccggtgagcagaa tggtacagacagctatagtacggagatatggtggaagaaataacaagatcaatgtccttgatttcatcataatcatctgt aaactaacactcatgtttgaaatattccaagatcagaagcagaagtcaaatacaacagatggtgcatcatttacaatgaa tgagtttctgtattacacaatgtactgttga |
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Protein
| Protein ID | pfu_aug2.0_267.1_23768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23768.t1 MSSARRKDFQSLKAELLQNNSLFIDEDFPPDNRSLTFSGQQPSGLRKVVWRRPKDIARNPKFIVRNATRFDLDQGYLGNC WFIAGASLLATKKKLLQRCVPHDQEFDHNYAGIFRFNFWWYGKWTEVVVDDYLPTDGYRLIYARNREEPDEFWAALFEKA YAKLRGCYEGLDGGKLQDSLVDMTGGISEDIDIKDKSQIPPNVFDVMWKTNDLNSFLGCSIALPQNASRSEVELANGLYM GHAYSITALAVVPYQGRSVQLCRLRNPWGRGEWKGEWSDNSPQMRSLSPEMKKQLGVVIRDEGEFWMPAQDLLSNFEEIQ FIHLTPDALTSELANNERKQQWTVTVYHDAWIRGLTAGGCGNAPYQDLYWKNPQFSITLTDPDENDNRGQCTIIVSLMEK EKNNKSEIAIGFDIYKLKNPQNRPLDVESAPRNALILKKRGGIYQYNREVTKRFELPPGSYVIIPSSFKPHEEAEFMLRM FTEKAATSSVLDETSGPSSPVIRPTDPIKDLFAKHAGELGKLHARELKRFLHDLSALELKEPMKFSMEACRSLITVMDSH KTGTLTFGDAQLAWKLILKQKTVFDQFDFDKSGNVDTYELSKMFGSLGFPVSRMVQTAIVRRYGGRNNKINVLDFIIIIC KLTLMFEIFQDQKQKSNTTDGASFTMNEFLYYTMYC |
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