Gene
| Gene Model ID | pfu_aug2.0_267.1_23775 |
|---|---|
| Locus | scaffold267.1 : 125103 ... 128235 : - |
| To GenomeBrowser | scaffold267.1:125103..128235 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_2307.1_22938 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| fas-associated death domain | GO:0002684 GO:0042981 GO:0044464 GO:0048522 GO:0048534 GO:0048584 GO:0051240 GO:0097191 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23775.t1 | 2 | 1 | DED | 1 | 79 | 4.0e-15 | 55.6 | 8.1e-19 | 4.0e-15 | 55.6 |
| pfu_aug2.0_267.1_23775.t1 | 2 | 1 | Death | 31 | 43 | 7.1e-09 | 35.3 | 1.7 | 8400.0 | -3.4 |
| pfu_aug2.0_267.1_23775.t1 | 2 | 2 | Death | 153 | 230 | 7.1e-09 | 35.3 | 2.4e-12 | 1.2e-08 | 34.5 |
| pfu_aug2.0_267.1_23775.t1 | 2 | 2 | DED | 220 | 230 | 4.0e-15 | 55.6 | 0.71 | 3500.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23775.t1 | gi|318065755|ref|NP_001187226.1| | Fas-associated death domain [Ictalurus punctatus] | 5.0e-16 |
| pfu_aug2.0_267.1_23775.t1 | gi|524874961|ref|XP_005094212.1| | PREDICTED: protein FADD-like [Aplysia californica] | 7.0e-16 |
| pfu_aug2.0_267.1_23775.t1 | gi|676479729|ref|XP_009061835.1| | hypothetical protein LOTGIDRAFT_68264, partial [Lottia gigantea] | 2.0e-13 |
| pfu_aug2.0_267.1_23775.t1 | gi|597739406|ref|XP_007231892.1| | PREDICTED: FAS-associated death domain protein-like [Astyanax mexicanus] | 4.0e-13 |
| pfu_aug2.0_267.1_23775.t1 | gi|752413423|ref|XP_011226989.1| | PREDICTED: FAS-associated death domain protein [Ailuropoda melanoleuca] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23775.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23775.t1 atgctcctgcagctatccaagtcattaaatgacgaggaccttgagaatatgaagtttttatgtaaagatatgatcaagaa aagagagagagaaaaaattacaacccccattgagttgtgggaacagttggagactcgggagaaacttggtccacagaact tgacattcttgaaaactttattagctaatagctgtgacggtaaattagaccttagaagaatagtggagaactatgaattg ggtggagttcagaatggaaccaccgcggctggaggtgggatccctccgccactaccaccaccaccacagtatcctgtcca tggggtacaacctttccagcttgctggcaatccacatgtctatcaagctcatcagccttatatgatgccaaatcaaggtt acggtcatatgaatcctcagtcatcagctttgatagagtcattgaagagggaaataaatttcttgacaaaaaaccttgga agggagtggagatttttcatgaggactctagatttaacagatgctgacatgagttccatcgagcaaagttgtccaaggaa tttaaaagatcagatctatcaatgcatgtgtcaagttattgtagaccatcaagggcagttgagaagagaagacattgtcc gagcattaagggactcatcagtcgagagatgtgacctggctgctcgcattgaagatggtgatatttag |
|
Protein
| Protein ID | pfu_aug2.0_267.1_23775.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23775.t1 MLLQLSKSLNDEDLENMKFLCKDMIKKREREKITTPIELWEQLETREKLGPQNLTFLKTLLANSCDGKLDLRRIVENYEL GGVQNGTTAAGGGIPPPLPPPPQYPVHGVQPFQLAGNPHVYQAHQPYMMPNQGYGHMNPQSSALIESLKREINFLTKNLG REWRFFMRTLDLTDADMSSIEQSCPRNLKDQIYQCMCQVIVDHQGQLRREDIVRALRDSSVERCDLAARIEDGDI |
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