Gene
| Gene Model ID | pfu_aug2.0_267.1_23777 |
|---|---|
| Locus | scaffold267.1 : 149646 ... 162820 : + |
| To GenomeBrowser | scaffold267.1:149646..162820 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_12777.1_17914 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha-2-macroglobulin receptor-associated protein | GO:0005102 GO:0065007 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23777.t1 | 4 | 1 | Alpha-2-MRAP_N | 22 | 102 | 3.4e-26 | 91.2 | 5.5e-29 | 1.6e-25 | 89.0 |
| pfu_aug2.0_267.1_23777.t1 | 2 | 1 | Alpha-2-MRAP_C | 30 | 65 | 1.4013e-45 | 155.4 | 0.025 | 74.0 | 3.1 |
| pfu_aug2.0_267.1_23777.t1 | 2 | 2 | Alpha-2-MRAP_C | 123 | 327 | 1.4013e-45 | 155.4 | 0.0 | 1.4013e-45 | 155.4 |
| pfu_aug2.0_267.1_23777.t1 | 4 | 2 | Alpha-2-MRAP_N | 124 | 165 | 3.4e-26 | 91.2 | 0.0044 | 13.0 | 5.4 |
| pfu_aug2.0_267.1_23777.t1 | 4 | 3 | Alpha-2-MRAP_N | 201 | 260 | 3.4e-26 | 91.2 | 5.9e-05 | 0.17 | 11.5 |
| pfu_aug2.0_267.1_23777.t1 | 4 | 4 | Alpha-2-MRAP_N | 302 | 314 | 3.4e-26 | 91.2 | 1.2 | 3500.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23777.t1 | gi|676479949|ref|XP_009061906.1| | hypothetical protein LOTGIDRAFT_235101 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_267.1_23777.t1 | gi|564270008|ref|XP_006273771.1| | PREDICTED: alpha-2-macroglobulin receptor-associated protein-like [Alligator mississippiensis] | 0.0 |
| pfu_aug2.0_267.1_23777.t1 | gi|591370550|ref|XP_007060098.1| | PREDICTED: alpha-2-macroglobulin receptor-associated protein [Chelonia mydas] | 0.0 |
| pfu_aug2.0_267.1_23777.t1 | gi|719744665|ref|XP_010210838.1| | PREDICTED: alpha-2-macroglobulin receptor-associated protein [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_267.1_23777.t1 | gi|514730977|ref|XP_005016247.1| | PREDICTED: alpha-2-macroglobulin receptor-associated protein [Anas platyrhynchos] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23777.t1 atgaaaactttagcttttattctttttgtaaatctgtttatcttgcttgaatgtggtaaatatgacaagttttcaaatac agagagacctttcaggacaataaaagtaaatcaaatttgggaaaaggctcaaaagaaattatcaggtcctaagctggctg atctatatgccgacttgactgttcaagataaagttgaacgacagctgaaaaaattgaaagctgaagatctggataaagat ggcttgaaggaagcagaagtaagacaaagaatgcttgaacttgtacacaagtatggcctacaggactatatatccatgcc acattttgatggtagaagtaatgaaatacccgaggattcccatacagatatgatacgagacaaaaaactgaagaaattat ggaaatctgctgaatatgccggattttcagaaaaagaattagaggaattaaaagaagaattttggcatcaacaaatgaag atagatgagtacaatacattgagggatgatataatatccatgggagagttgaatgataatgctattgaacctggaaaaga tttcatgagaagtaggaaagagaaaaagatggatttaaaagtcaaagaaaagcagcttaaagaatcatatgacaaattag aaacactagcaaaagtctccagttatgataatctggaattcaaagatcccagagtgtatgagttatgggccttagcaaag agggcaaaaatgtcggaagaagaactggaatcattcaagtcggaattgaagcattttgagcaccggttaggtaagcatga tttctatcaggaacagctcaaggtatcggaggacgctatgatctacagtgataaaaacttacagatcccagataaacatc ttcaactggagcagaaagccagagattatgagagaaaggtccagaaatatcacacagatttgcgatacaggattgacaag gcactacagcattctgagctgtga |
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Protein
| Protein ID | pfu_aug2.0_267.1_23777.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23777.t1 MKTLAFILFVNLFILLECGKYDKFSNTERPFRTIKVNQIWEKAQKKLSGPKLADLYADLTVQDKVERQLKKLKAEDLDKD GLKEAEVRQRMLELVHKYGLQDYISMPHFDGRSNEIPEDSHTDMIRDKKLKKLWKSAEYAGFSEKELEELKEEFWHQQMK IDEYNTLRDDIISMGELNDNAIEPGKDFMRSRKEKKMDLKVKEKQLKESYDKLETLAKVSSYDNLEFKDPRVYELWALAK RAKMSEEELESFKSELKHFEHRLGKHDFYQEQLKVSEDAMIYSDKNLQIPDKHLQLEQKARDYERKVQKYHTDLRYRIDK ALQHSEL |
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