Gene
| Gene Model ID | pfu_aug2.0_267.1_23780 |
|---|---|
| Locus | scaffold267.1 : 195625 ... 208703 : + |
| To GenomeBrowser | scaffold267.1:195625..208703 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_6471.1_02257 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23780.t1 | 3 | 1 | Piwi | 294 | 342 | 0.0 | 216.0 | 0.12 | 910.0 | -1.5 |
| pfu_aug2.0_267.1_23780.t1 | 1 | 1 | PAZ | 312 | 385 | 2.7e-16 | 59.0 | 7.6e-20 | 5.6e-16 | 58.0 |
| pfu_aug2.0_267.1_23780.t1 | 3 | 2 | Piwi | 535 | 675 | 0.0 | 216.0 | 3.2e-34 | 2.3e-30 | 105.5 |
| pfu_aug2.0_267.1_23780.t1 | 3 | 3 | Piwi | 673 | 763 | 0.0 | 216.0 | 1.3e-35 | 9.6e-32 | 110.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23780.t1 | gi|156363594|ref|XP_001626127.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_267.1_23780.t1 | gi|166795323|ref|NP_001107667.1| | seali [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_267.1_23780.t1 | gi|585687770|ref|XP_006820557.1| | PREDICTED: LOW QUALITY PROTEIN: piwi-like protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_267.1_23780.t1 | gi|556966700|ref|XP_005992677.1| | PREDICTED: piwi-like protein 2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_267.1_23780.t1 | gi|675868420|ref|XP_009019770.1| | hypothetical protein HELRODRAFT_65566, partial [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23780.t1 atggcaactggaccaggatttggtcgaggtggcagaggggctgccctgctgcaggctctgagtcaacctgccaggaaacc tggagatacgaaggaacaagatgaggccaaggctgcccccactcccagcggagcagcccctcccccagccccatcacaga ctgtaccctcagtacccatgggaaggggagcatttctctctggactgctacaacagaaaggcctttcacagccaggaacg tcacaaccagctgttccaggtggaagaggggtctctaatctgcaagccttgctccaaactgctggtcgagggggaggagc tcgtggacctactccagctcaacctttacctcaggtttcccctcagtccctacccccatctagtcaggtatcaccacgcc ctggtcagtcttcccctccccgcagtcagggatcacctggggaaccacccacttccaggtttagtcgtatgggattagac agaccggaggctgtacacagatctggctcagatggtagagcggtaaaactgagtggaaactacatccgattaaagtgtct aaacccaggtgtataccaataccatgtctcattccaacctaacattgacagtaagaacatgaggtttaagatgatgacgg agcatgtgaacgtgataggcagcaccaaggcctttgacggagcaattctttatttacccataagactcaaagatcaggag acgaagctaaccagtaagaggctgacagacggtgctatgattactatcacagtcagattaaccaaagttgtgccaccaga acaatgtgtgcctttatataacatcatctttagaaggcttgaagtttggcctggatatataacatctgtttgtgagaatg aaggaggtcttatgttgttagcagatgccagtcacagagtgcttcgtacagaaaccgtcctacaaatgatgcaaaacatt gtcagaaggaatgctcagggattccaagatgaatgcacaaaggcccttgtgggtaccgtagttctgactcgttacaacaa caaaacttacagaattgacgatattgtatgggacaagactccccaacattccttttcaaccagcagtgggtcctccctca ccttcatggattattacaagtatgcacatgacttggcattccatactcgagtaactccgtcccaaagagtcgttacaatg aaaaagttcataaactcagttaacggcaacccagatgcgaaagcagagttgacaaaatgggggttggagttggaagagaa gaccatagatattgatggcagagtagtccccacagagaagatatctttccgtgacggtcagtccgtactggcaggagatt ctgcagactggggtggagccgcaacaaggaacaaagtcatcactgctgtcgacttccgtagatgggtcgtcctttacaca aagagagatcaaccaagagctcagaactttattcagacaatgatgaagtgttgtccccagatgggcattatgtgtgataa tccgtcccgttgtgaattacatgatgatcgcacagaaacattcgtcaaagccttgagggagcaagtgaatccatctgttc aaattgttgtgataatatgtcccacatctagagatgacagatattctgcaattaagaagctctgttgtgttgattgtcca gtgccttcacaggtaatcatatcaaaaaccattggtgatgagaggaagttgagatcagtatcacagaaaattgccttgca gatgaattgtaagctaggtggagaactgtgggctgtggacatccctatgaaaaacttgatggttgtgggaattgatgtgt accatgatgctgcacggcatagaacttccatagcaggctttgtagcgagcaccaacaagaactgcacacgctggtacagt aagacctgcttccagttaccaggacaagagctggttgacggtctgaaagtctgtatgacttctgccatcagaaaatacca tgagggaagagattatgataatccagcacctgggacagtggtagatcatactctgaccaggagggacaagtatgactttt tcctagtatctcagcatgtccgacaagggactgtttctcccactcattacatttgcgtccacgacacatcatccatgaaa ccagatcatatgcagaggctcagctttaaaatgacccacctgtactacaactggccaggaactgtacgagtgcctgctcc ttgccagtatgcccacaagttggcctatttagtgggacagaacatccacaaagagccttcggcagcattatcagacagac tcttcttcctctaa |
|
Protein
| Protein ID | pfu_aug2.0_267.1_23780.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23780.t1 MATGPGFGRGGRGAALLQALSQPARKPGDTKEQDEAKAAPTPSGAAPPPAPSQTVPSVPMGRGAFLSGLLQQKGLSQPGT SQPAVPGGRGVSNLQALLQTAGRGGGARGPTPAQPLPQVSPQSLPPSSQVSPRPGQSSPPRSQGSPGEPPTSRFSRMGLD RPEAVHRSGSDGRAVKLSGNYIRLKCLNPGVYQYHVSFQPNIDSKNMRFKMMTEHVNVIGSTKAFDGAILYLPIRLKDQE TKLTSKRLTDGAMITITVRLTKVVPPEQCVPLYNIIFRRLEVWPGYITSVCENEGGLMLLADASHRVLRTETVLQMMQNI VRRNAQGFQDECTKALVGTVVLTRYNNKTYRIDDIVWDKTPQHSFSTSSGSSLTFMDYYKYAHDLAFHTRVTPSQRVVTM KKFINSVNGNPDAKAELTKWGLELEEKTIDIDGRVVPTEKISFRDGQSVLAGDSADWGGAATRNKVITAVDFRRWVVLYT KRDQPRAQNFIQTMMKCCPQMGIMCDNPSRCELHDDRTETFVKALREQVNPSVQIVVIICPTSRDDRYSAIKKLCCVDCP VPSQVIISKTIGDERKLRSVSQKIALQMNCKLGGELWAVDIPMKNLMVVGIDVYHDAARHRTSIAGFVASTNKNCTRWYS KTCFQLPGQELVDGLKVCMTSAIRKYHEGRDYDNPAPGTVVDHTLTRRDKYDFFLVSQHVRQGTVSPTHYICVHDTSSMK PDHMQRLSFKMTHLYYNWPGTVRVPAPCQYAHKLAYLVGQNIHKEPSAALSDRLFFL |
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