Gene
| Gene Model ID | pfu_aug2.0_267.1_23782 |
|---|---|
| Locus | scaffold267.1 : 216092 ... 220864 : - |
| To GenomeBrowser | scaffold267.1:216092..220864 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_13463.1_53951 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23782.t1 | 2 | 1 | UPF0561 | 13 | 48 | 2.7e-07 | 30.4 | 1.7e-09 | 2.5e-05 | 24.1 |
| pfu_aug2.0_267.1_23782.t1 | 2 | 2 | UPF0561 | 53 | 73 | 2.7e-07 | 30.4 | 0.00034 | 5.1 | 6.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23782.t1 | gi|676442088|ref|XP_009049696.1| | hypothetical protein LOTGIDRAFT_238767 [Lottia gigantea] | 1.0e-23 |
| pfu_aug2.0_267.1_23782.t1 | gi|524891039|ref|XP_005102058.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Aplysia californica] | 6.0e-17 |
| pfu_aug2.0_267.1_23782.t1 | gi|148234895|ref|NP_001090032.1| | UPF0561 protein C2orf68 homolog [Xenopus laevis] | 2.0e-09 |
| pfu_aug2.0_267.1_23782.t1 | gi|115663044|ref|XP_001201006.1| | PREDICTED: UPF0561 protein C2orf68 [Strongylocentrotus purpuratus] | 5.0e-08 |
| pfu_aug2.0_267.1_23782.t1 | gi|198422289|ref|XP_002123032.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Ciona intestinalis] | 4.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23782.t1 atgacaaaaactttaacattgggcataacttttgtatgagacaactatgacaaagaggtgaaggcaaagcagtgcgagaa acacaaaccaaaaagtaacaagaccaggaaacctgatatcagcgtctacgtccctcccacaaaactcaaagatggtcaga atccccttttccagctagaatttgagaacagagatggtgaaatttttactacacagatttatgcttgtgataaaggtaat gcaattgcaaccaagattggccaagaaatgaacctaccccctgattttgtctcggctctagaggagaggattgatgagga gatattgatgagacttccggctcaggatacgtga |
|
Protein
| Protein ID | pfu_aug2.0_267.1_23782.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23782.t1 MTKTLTLGITFVXDNYDKEVKAKQCEKHKPKSNKTRKPDISVYVPPTKLKDGQNPLFQLEFENRDGEIFTTQIYACDKGN AIATKIGQEMNLPPDFVSALEERIDEEILMRLPAQDT |
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