Gene
| Gene Model ID | pfu_aug2.0_267.1_23784 |
|---|---|
| Locus | scaffold267.1 : 243365 ... 258279 : + |
| To GenomeBrowser | scaffold267.1:243365..258279 |
| Genes list of scaffold | scaffold267.1 |
| Synonym | pfu_aug1.0_3293.1_23285 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_267.1_23784.t1 | 13 | 1 | EF-hand_1 | 149 | 159 | 1.7e-27 | 92.5 | 3.4 | 5500.0 | -2.9 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 1 | EF-hand_6 | 149 | 160 | 3.9e-24 | 82.3 | 1.7 | 2800.0 | -1.3 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 2 | EF-hand_1 | 168 | 194 | 1.7e-27 | 92.5 | 0.12 | 200.0 | 1.6 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 2 | EF-hand_6 | 169 | 194 | 3.9e-24 | 82.3 | 1.7 | 2800.0 | -1.3 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 1 | EF-hand_7 | 170 | 229 | 1.1e-30 | 105.5 | 0.015 | 25.0 | 5.0 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 1 | EF-hand_8 | 180 | 230 | 1.8e-29 | 101.1 | 0.00063 | 1.0 | 9.0 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 3 | EF-hand_1 | 221 | 230 | 1.7e-27 | 92.5 | 2.2 | 3600.0 | -2.3 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 3 | EF-hand_6 | 286 | 302 | 3.9e-24 | 82.3 | 0.4 | 670.0 | 0.6 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 2 | EF-hand_7 | 287 | 334 | 1.1e-30 | 105.5 | 8.6e-06 | 0.014 | 15.4 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 4 | EF-hand_1 | 287 | 303 | 1.7e-27 | 92.5 | 0.045 | 75.0 | 2.9 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 2 | EF-hand_8 | 294 | 332 | 1.8e-29 | 101.1 | 0.017 | 27.0 | 4.4 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 4 | EF-hand_6 | 311 | 336 | 3.9e-24 | 82.3 | 5.2e-05 | 0.085 | 12.7 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 5 | EF-hand_1 | 311 | 334 | 1.7e-27 | 92.5 | 2.9e-06 | 0.0048 | 16.1 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 1 | EF-hand_5 | 318 | 328 | 5.4e-12 | 44.4 | 0.54 | 890.0 | -0.5 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 3 | EF-hand_7 | 379 | 415 | 1.1e-30 | 105.5 | 4.4e-05 | 0.072 | 13.2 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 5 | EF-hand_6 | 393 | 418 | 3.9e-24 | 82.3 | 1.5e-05 | 0.024 | 14.4 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 2 | EF-hand_5 | 393 | 415 | 5.4e-12 | 44.4 | 0.12 | 190.0 | 1.6 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 3 | EF-hand_8 | 393 | 418 | 1.8e-29 | 101.1 | 0.0012 | 2.0 | 8.0 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 6 | EF-hand_1 | 393 | 418 | 1.7e-27 | 92.5 | 1.7e-06 | 0.0028 | 16.8 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 3 | EF-hand_5 | 508 | 527 | 5.4e-12 | 44.4 | 0.02 | 33.0 | 4.0 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 6 | EF-hand_6 | 509 | 530 | 3.9e-24 | 82.3 | 0.00029 | 0.47 | 10.4 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 4 | EF-hand_7 | 509 | 602 | 1.1e-30 | 105.5 | 1.8e-05 | 0.03 | 14.4 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 7 | EF-hand_1 | 509 | 530 | 1.7e-27 | 92.5 | 0.0074 | 12.0 | 5.4 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 4 | EF-hand_8 | 518 | 564 | 1.8e-29 | 101.1 | 3.0e-07 | 0.00049 | 19.6 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 8 | EF-hand_1 | 552 | 564 | 1.7e-27 | 92.5 | 2.4 | 4000.0 | -2.4 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 7 | EF-hand_6 | 581 | 605 | 3.9e-24 | 82.3 | 0.37 | 610.0 | 0.7 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 9 | EF-hand_1 | 590 | 603 | 1.7e-27 | 92.5 | 0.13 | 220.0 | 1.5 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 5 | EF-hand_8 | 657 | 684 | 1.8e-29 | 101.1 | 0.0013 | 2.1 | 8.0 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 8 | EF-hand_6 | 658 | 683 | 3.9e-24 | 82.3 | 0.0019 | 3.1 | 7.9 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 5 | EF-hand_7 | 658 | 716 | 1.1e-30 | 105.5 | 2.5e-09 | 4.1e-06 | 26.8 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 10 | EF-hand_1 | 658 | 685 | 1.7e-27 | 92.5 | 0.00029 | 0.48 | 9.8 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 4 | EF-hand_5 | 669 | 681 | 5.4e-12 | 44.4 | 0.041 | 67.0 | 3.0 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 6 | EF-hand_8 | 670 | 719 | 1.8e-29 | 101.1 | 1.6e-09 | 2.6e-06 | 26.9 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 11 | EF-hand_1 | 694 | 715 | 1.7e-27 | 92.5 | 0.001 | 1.7 | 8.1 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 9 | EF-hand_6 | 699 | 721 | 3.9e-24 | 82.3 | 0.079 | 130.0 | 2.8 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 5 | EF-hand_5 | 700 | 715 | 5.4e-12 | 44.4 | 0.00066 | 1.1 | 8.7 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 10 | EF-hand_6 | 773 | 798 | 3.9e-24 | 82.3 | 1.2e-07 | 0.0002 | 20.9 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 6 | EF-hand_5 | 773 | 796 | 5.4e-12 | 44.4 | 4.8e-05 | 0.08 | 12.3 |
| pfu_aug2.0_267.1_23784.t1 | 6 | 6 | EF-hand_7 | 773 | 830 | 1.1e-30 | 105.5 | 3.1e-11 | 5.1e-08 | 32.9 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 7 | EF-hand_8 | 773 | 798 | 1.8e-29 | 101.1 | 4.9e-06 | 0.008 | 15.7 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 12 | EF-hand_1 | 773 | 798 | 1.7e-27 | 92.5 | 4.8e-08 | 7.9e-05 | 21.6 |
| pfu_aug2.0_267.1_23784.t1 | 8 | 8 | EF-hand_8 | 801 | 830 | 1.8e-29 | 101.1 | 0.00013 | 0.21 | 11.2 |
| pfu_aug2.0_267.1_23784.t1 | 11 | 11 | EF-hand_6 | 811 | 829 | 3.9e-24 | 82.3 | 0.074 | 120.0 | 2.9 |
| pfu_aug2.0_267.1_23784.t1 | 13 | 13 | EF-hand_1 | 812 | 830 | 1.7e-27 | 92.5 | 0.013 | 21.0 | 4.7 |
| pfu_aug2.0_267.1_23784.t1 | 7 | 7 | EF-hand_5 | 814 | 824 | 5.4e-12 | 44.4 | 0.029 | 48.0 | 3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_267.1_23784.t1 | gi|530575326|ref|XP_005282044.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 6-like isoform X3 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_267.1_23784.t1 | gi|676442082|ref|XP_009049694.1| | hypothetical protein LOTGIDRAFT_238765 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_267.1_23784.t1 | gi|198429619|ref|XP_002128494.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 6 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_267.1_23784.t1 | gi|291229899|ref|XP_002734907.1| | PREDICTED: EF-hand calcium-binding domain-containing protein 6-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_267.1_23784.t1 | gi|260802766|ref|XP_002596263.1| | hypothetical protein BRAFLDRAFT_117976 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_267.1_23784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23784.t1 atgtcgcaggtaggcatcccgcggccctcctctatgggccagggaccacaaaaaatgggggtgactcttcctcaaataga gcaccctctgtcaagaatgggcaatcctgtgaatatggacattagaggaagctcccgggccggagatcgcccaacctcac accctatgggccgtcctcttgcaaatgaaaacgtctacacgggcagaaagagcgttagcgcacacgggagggacagcaga atgacccccttcagaacgcagatggcaccggtccctattgacagtatacccgaagggatagaagtcacctatggcgatcc cggcaagaccaggttgcctatatttggtaatcgtgcagatattggaagtcgtatggagaatggtggtattaccagtagaa atggtatgcattcccgtatgtcacaagcctcccaacaggccaggctggaaatcgacgagcttgaggccatgttacgtcag agaatcaagggaagcttttacgaggtcaagaaaaagttcaaggacaatgacccagaacagaaaggaaatgtttcacgaga agctttccatcgagtgatcacgaccattctgaacgccagtattaaccagaacgtatacaacagactgatggaacgtctgg gattcaaggacaaacaggtcatcaactacagcgaattcttctcctatttccacgagggggtcaactctaacgactatccc cgctggatggaccctgtccagaggcagtggccggagagggccaccatgaactcctcacaagtccacgcccaactcaaaga aaaagtcaaacaaaagtttttggacatggcagatttaatacctcagatgaaccccggaggaacgggtaggatactgaaac ctgaattcagacagatgctgaataaattaatgttctatatggaagatactgaatttgaaaaactttggaaaaagtatgat ccaaataattcaggaacagtgaacggtgaacagttcttaaaatcattgggtatcagtttaggtggcgagatcaacaataa caacgctatgatagataatatacccgaaataggactgacatcgaccaggacaccaagaaggaaggagatagagaggaagc agtccctagatatagaaagatggctgaaaaacaaattcagagaaggttgtcataatctacaggaagcttttgaagcaaag gacaaatcaaataacggcgttgtcaccttcgacgacttcctgtccgtcctcgctacgaacaacttgaagctggagaaacg tctgctcgcggcgtttttgtcgcggtgtggcgttcaggctcgcagagatggggtcccatacagggaattcttacatcgtt tccaggaccgctcggagttgggcatgacacacaatatcttgaccaatccaaaacacagggcgaacgaccgaccagaaagc ccgggagctcaatcaacaattagtggtatagaggttcaacttatgaacatgttccagagagatttcctggcattgttggg aacattcaagagcatcgataaattaggaaccaacgtgattagccaggaggaattccgggcagccattgaaagtaagttcc atttccagctccgtgatgaccagtttatggcttttgtagacagaatcccattggacgaggatggcaatgttagatatgct gacttcatgaatcattttgacacaaaattcgatcttcgtccagaaatttctcgcggagaaatccgagatgtatggaagac attcatcacaaataccgataagacactggattaccatgaattcgtccgtcattttggcttctccaagaaatcagcacatt tccctaatgccaagaataacccacccagacgtggtgatgctgattacatgatcaggtcacgaaaactgaactgtgctgcc gatatgctgcaagataaccttaggtcaaaggttgattatttatgggaagatttgaggaaagaatttgttgagatggatcc atacggaactggctatgtatctaaggaggaatataaagacgttctcacagaactctgtgtccatctgagtgattacgaaa tcaatctgctatgtgagaagttcgacatgaagaaagatggaagagtttcctatattgagttcctgaaaccgtttgcactg aagaagcagatttggcgtcatggaaacaacatgttgtcactgctggcacacccacaaccagaactgcctataggagatat agtagaacctcctcagaaggggcttcatggtatcacagccaaactgaggcaaaagttggctggagactggaagaatctga ggagagctttcaggaaattagacacgcgtaacgatggatatttgtcagtcccagagttcagatctgtattgaaattagca aacgttattttagacgaagacgaagtttatcacgtgcttacacagtttgatcataacatgtcaggaaaaattccctacga aaaatttattgaagagacattcaaaccaccaacccgtcaaagtgtgaaaaagctatga |
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Protein
| Protein ID | pfu_aug2.0_267.1_23784.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_267.1_23784.t1 MSQVGIPRPSSMGQGPQKMGVTLPQIEHPLSRMGNPVNMDIRGSSRAGDRPTSHPMGRPLANENVYTGRKSVSAHGRDSR MTPFRTQMAPVPIDSIPEGIEVTYGDPGKTRLPIFGNRADIGSRMENGGITSRNGMHSRMSQASQQARLEIDELEAMLRQ RIKGSFYEVKKKFKDNDPEQKGNVSREAFHRVITTILNASINQNVYNRLMERLGFKDKQVINYSEFFSYFHEGVNSNDYP RWMDPVQRQWPERATMNSSQVHAQLKEKVKQKFLDMADLIPQMNPGGTGRILKPEFRQMLNKLMFYMEDTEFEKLWKKYD PNNSGTVNGEQFLKSLGISLGGEINNNNAMIDNIPEIGLTSTRTPRRKEIERKQSLDIERWLKNKFREGCHNLQEAFEAK DKSNNGVVTFDDFLSVLATNNLKLEKRLLAAFLSRCGVQARRDGVPYREFLHRFQDRSELGMTHNILTNPKHRANDRPES PGAQSTISGIEVQLMNMFQRDFLALLGTFKSIDKLGTNVISQEEFRAAIESKFHFQLRDDQFMAFVDRIPLDEDGNVRYA DFMNHFDTKFDLRPEISRGEIRDVWKTFITNTDKTLDYHEFVRHFGFSKKSAHFPNAKNNPPRRGDADYMIRSRKLNCAA DMLQDNLRSKVDYLWEDLRKEFVEMDPYGTGYVSKEEYKDVLTELCVHLSDYEINLLCEKFDMKKDGRVSYIEFLKPFAL KKQIWRHGNNMLSLLAHPQPELPIGDIVEPPQKGLHGITAKLRQKLAGDWKNLRRAFRKLDTRNDGYLSVPEFRSVLKLA NVILDEDEVYHVLTQFDHNMSGKIPYEKFIEETFKPPTRQSVKKL |
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