Gene
| Gene Model ID | pfu_aug2.0_269.1_30537 |
|---|---|
| Locus | scaffold269.1 : 146706 ... 174099 : + |
| To GenomeBrowser | scaffold269.1:146706..174099 |
| Genes list of scaffold | scaffold269.1 |
| Synonym | pfu_aug1.0_25205.1_62361 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_269.1_30537.t1 | 3 | 1 | CENP-F_leu_zip | 139 | 263 | 7.0e-09 | 35.6 | 0.0011 | 4.3 | 7.2 |
| pfu_aug2.0_269.1_30537.t1 | 3 | 2 | CENP-F_leu_zip | 273 | 401 | 7.0e-09 | 35.6 | 1.9e-12 | 7.0e-09 | 35.6 |
| pfu_aug2.0_269.1_30537.t1 | 3 | 3 | CENP-F_leu_zip | 439 | 525 | 7.0e-09 | 35.6 | 0.42 | 1500.0 | -1.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_269.1_30537.t1 | gi|524897875|ref|XP_005105393.1| | PREDICTED: intraflagellar transport protein 74 homolog [Aplysia californica] | 0.0 |
| pfu_aug2.0_269.1_30537.t1 | gi|632950509|ref|XP_007890763.1| | PREDICTED: intraflagellar transport protein 74 homolog isoform X2 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_269.1_30537.t1 | gi|632950505|ref|XP_007890761.1| | PREDICTED: intraflagellar transport protein 74 homolog isoform X1 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_269.1_30537.t1 | gi|311245683|ref|XP_001926178.2| | PREDICTED: intraflagellar transport protein 74 homolog isoform X1 [Sus scrofa] | 0.0 |
| pfu_aug2.0_269.1_30537.t1 | gi|562827002|ref|XP_006143138.1| | PREDICTED: intraflagellar transport protein 74 homolog isoform X1 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_269.1_30537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_269.1_30537.t1 atggcaaagaaaattcgggtatggcgtacgtttgaaaatttcccagagttccaaagaaaaattctttcgactgcttttcc tgtcaacagtaaactaagcagaaatactagaatgagcagcaacagactgccgagtgccagtggcaacagacctcgaactg gagccagaggacaaggagggggaggagctggtctcccccctgggactgctaccagactgacaacagcaatgaaccctggg acagctagacctggtactagaggtggacagacaggagggggtgtggccctgagctcccaggtgactgttgtagacaggcc aatgacacaacagggtctgggtggaatgaaaactgggatcaaaggtcagagacaggtgaaagacaagacttactttattg gactgatcagaggaaaagtaaatgaactgaatgcagaaatgaccaaactgaagaaagacgtagaagttggaaatgaggaa agttcttccttcttaacttatgaaaaacgggcggagacactagccagtgagatcagggatcttcagggggagcttggtga ttataatactcttgttgacaaactgaccacagatgaggatatacaagatgttgaatttgatctaaatgatctcagggcaa acaatgaaagagaggcaaagaaaatagaagatctctttgaggtgaaaaaacagaaagaagaccagataaagcagcttgag caggagttagaccaagaaaagagaatggcagacaatatggtcaatgatatgaacccagaaatgcgacaaaaatacttcaa gctaaaagatgctaatgaacactatctaaggcagttagagagagggcaacaagaacttgatgtcttgacatcaaaaattg aaaatctcaatgacgaattgtcaatgtctcaagtcaaacaagaagctgtttcctgtgacggtcacttagaaaaattcata acaaatgacatcagagaaaaaatagaatcaatgcaggaagagagtagacaacttgatttagatatagaggaaaaccaagg tgaaagaaatcagaaatacaaggaactgaagaaaagggaagaaacgatagatgaattcctaaacaactttgaggagagta aaacttcagaaatacaaagaataggacagtcagaacagaatgtcgtacacttgttggaacacatgagcaggaatatgagt agatttaacgccctaccaacacctcaggagctaggcaccatgaaagaagacctggactttaagacaggagaaatgcaaaa atcagagcaaacaacagtgggtctagctgcagagagtgacaaacttcagcaggacttacagaaggtagagcagttagagg agaagattaacacagagttagtaatgctgaaagagaagatagctaacatggaaagggaccttgtcacgtactctgatctc agtacacttaaagacgattcagagaaaaaacgaaggaaactgatggatgacagagtagttctacagaagaggaaagacca gttcaaaaagaccatgcaacatatgacaagtagatatgaaagtatgaaagctcaacttaacgaacatgaaacttacacac agcttggaaatttggagaggaaatggcagcaccatgaacagacaaacttcgtcatgaaagattttattggggcaaagaca atggagtgtgactacagacctatactaaagagagtctacaactctgtggcggaatacaacactgtactacaaaaccagat ggctggcaaaccaagtgtttag |
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Protein
| Protein ID | pfu_aug2.0_269.1_30537.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_269.1_30537.t1 MAKKIRVWRTFENFPEFQRKILSTAFPVNSKLSRNTRMSSNRLPSASGNRPRTGARGQGGGGAGLPPGTATRLTTAMNPG TARPGTRGGQTGGGVALSSQVTVVDRPMTQQGLGGMKTGIKGQRQVKDKTYFIGLIRGKVNELNAEMTKLKKDVEVGNEE SSSFLTYEKRAETLASEIRDLQGELGDYNTLVDKLTTDEDIQDVEFDLNDLRANNEREAKKIEDLFEVKKQKEDQIKQLE QELDQEKRMADNMVNDMNPEMRQKYFKLKDANEHYLRQLERGQQELDVLTSKIENLNDELSMSQVKQEAVSCDGHLEKFI TNDIREKIESMQEESRQLDLDIEENQGERNQKYKELKKREETIDEFLNNFEESKTSEIQRIGQSEQNVVHLLEHMSRNMS RFNALPTPQELGTMKEDLDFKTGEMQKSEQTTVGLAAESDKLQQDLQKVEQLEEKINTELVMLKEKIANMERDLVTYSDL STLKDDSEKKRRKLMDDRVVLQKRKDQFKKTMQHMTSRYESMKAQLNEHETYTQLGNLERKWQHHEQTNFVMKDFIGAKT MECDYRPILKRVYNSVAEYNTVLQNQMAGKPSV |
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