Gene
| Gene Model ID | pfu_aug2.0_27.1_23254 |
|---|---|
| Locus | scaffold27.1 : 16026 ... 34943 : + |
| To GenomeBrowser | scaffold27.1:16026..34943 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_8645.1_45911 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23254.t1 | 2 | 1 | GRIP | 476 | 486 | 5.3e-17 | 61.0 | 0.49 | 7300.0 | -3.5 |
| pfu_aug2.0_27.1_23254.t1 | 2 | 2 | GRIP | 518 | 561 | 5.3e-17 | 61.0 | 1.8e-20 | 2.6e-16 | 58.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23254.t1 | gi|524914304|ref|XP_005111968.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_27.1_23254.t1 | gi|573892094|ref|XP_006633803.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 1-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_27.1_23254.t1 | gi|676431909|ref|XP_009046403.1| | hypothetical protein LOTGIDRAFT_212469 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_27.1_23254.t1 | gi|488564048|ref|XP_004471721.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 1 [Dasypus novemcinctus] | 0.0 |
| pfu_aug2.0_27.1_23254.t1 | gi|671026640|ref|XP_008704127.1| | PREDICTED: GRIP and coiled-coil domain-containing protein 1 [Ursus maritimus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23254.t1 atggacagagcatcaaggaatgaattgttgaagaccattgaaagtcaaagagagaagatagaaagatatgagaaaaaact tccaaatcttgttcaagcctataaaagtctccaaaaagagaaggaagctatagaaaatagtttcaaagtactgtccacct cagcctctggtagagatgacagacagacagacagtgagaaaacaagggattctgaagatggcacgagcaacgaaacacaa aactctaacaatggagaattcactgatccacttcaggcacataaagaacagacaaagtcagatgacagcgataaagagga gcagatgaagacattgtcacagtcactgtacacactgacagaggaaaaatctaaactagaagccagctatattgctgata aaaaatctcttatacaagagaaggaggaactacagaccaaacttgatgaagaaatacagaaaaatgaagagcatattaaa acactggacaaacaaatacaagagctgaagaatcgtgtacgtggacaacaaaaggagcgagagaaggagcagaatgacca cgccctgatgttgagggagttacagaaattactgggggaggagagaactaaagtagaagtactggagaataagctggagg ataccagtgaagttctaaaggaaaaagaaaagttggtaccaagtatgtcaggagtgtatgagaaaagaataaaggacctg aattcaaagttagaagcaagtaaaaatgaaactagagctctcagggagaagtccagactacctacaccagagcttatagc agcacagagggaaatagctgatctcaagaaaacatctcaccctgtactgattcaagatctgttatatgatgaggataacc agtgcacaatgtgtaaaaaactgaaagaagaactagaagttgccaaggaagaatttgagagatacaagctccgagctcag tctgtgttaaaaaataaagccactaaagacagtggaccaaataaagaaatggaagcgttgaagtcccaggtggctgaact gagagagaaaataaagactcaccatgtacagcatgaggaggctatacaacgagccaatcagagagccgatagcgcctcca agaccgttatatcgctacaggaaaaacacaaacaagatctcctacatcaccaggccgaacatcagcatcaagtcagccag ctcgaaatagaaataaaaaaacaaagggagagaactgtgtcattactgtctgagaaagaccgtgaaatagaagttctgag agcatctactccagtgtttgatggtggctacctagctcacatcaggaatcctccagacgcagcggcatcagaggaaatgc aggctaagtcagaggaggagcaggcagtgcacagacttctgaagatgggtcaaggggaagctaaccttctgtatttcagt caggaacaggcgagaaaagagttaacgagcttctctaaagaggaggctctccaggagcaggtggagaacatgagggagga agtgaggaaagtggagagaaacattgctcgtgaaggggcaaacttggagtacctgaaaaatgtgacatttaagtttctaa ccagtgttgatccacgagccaaacagcagatgttaaatgctatcaccacaatattacagttcagtccgcaagaaaaatct gtagttcatacacaattcaaaagttggtggacaagtacaagattttcagtcagttcttaa |
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Protein
| Protein ID | pfu_aug2.0_27.1_23254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23254.t1 MDRASRNELLKTIESQREKIERYEKKLPNLVQAYKSLQKEKEAIENSFKVLSTSASGRDDRQTDSEKTRDSEDGTSNETQ NSNNGEFTDPLQAHKEQTKSDDSDKEEQMKTLSQSLYTLTEEKSKLEASYIADKKSLIQEKEELQTKLDEEIQKNEEHIK TLDKQIQELKNRVRGQQKEREKEQNDHALMLRELQKLLGEERTKVEVLENKLEDTSEVLKEKEKLVPSMSGVYEKRIKDL NSKLEASKNETRALREKSRLPTPELIAAQREIADLKKTSHPVLIQDLLYDEDNQCTMCKKLKEELEVAKEEFERYKLRAQ SVLKNKATKDSGPNKEMEALKSQVAELREKIKTHHVQHEEAIQRANQRADSASKTVISLQEKHKQDLLHHQAEHQHQVSQ LEIEIKKQRERTVSLLSEKDREIEVLRASTPVFDGGYLAHIRNPPDAAASEEMQAKSEEEQAVHRLLKMGQGEANLLYFS QEQARKELTSFSKEEALQEQVENMREEVRKVERNIAREGANLEYLKNVTFKFLTSVDPRAKQQMLNAITTILQFSPQEKS VVHTQFKSWWTSTRFSVSS |
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