Gene
| Gene Model ID | pfu_aug2.0_27.1_23262 |
|---|---|
| Locus | scaffold27.1 : 127143 ... 128875 : - |
| To GenomeBrowser | scaffold27.1:127143..128875 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_14142.1_61308 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin-like protein 11 | GO:0016491 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23262.t1 | 2 | 1 | EF-hand_8 | 12 | 37 | 1.0e-16 | 60.2 | 1.1e-07 | 0.00015 | 21.3 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 1 | EF-hand_1 | 14 | 40 | 3.2e-17 | 60.4 | 2.4e-10 | 3.3e-07 | 29.1 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 1 | EF-hand_6 | 14 | 41 | 1.8e-13 | 49.0 | 3.0e-11 | 4.1e-08 | 32.4 |
| pfu_aug2.0_27.1_23262.t1 | 1 | 1 | EF-hand_7 | 15 | 73 | 4.0e-17 | 62.0 | 3.6e-20 | 4.9e-17 | 61.8 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 1 | EF-hand_5 | 15 | 38 | 3.9e-13 | 48.0 | 2.6e-09 | 3.5e-06 | 26.0 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 2 | EF-hand_8 | 27 | 74 | 1.0e-16 | 60.2 | 1.0e-14 | 1.4e-11 | 43.8 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 2 | EF-hand_1 | 50 | 74 | 3.2e-17 | 60.4 | 1.7e-10 | 2.3e-07 | 29.6 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 2 | EF-hand_5 | 54 | 74 | 3.9e-13 | 48.0 | 1.6e-07 | 0.00022 | 20.4 |
| pfu_aug2.0_27.1_23262.t1 | 2 | 2 | EF-hand_6 | 57 | 74 | 1.8e-13 | 49.0 | 1.4e-05 | 0.019 | 14.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23262.t1 | gi|743774547|ref|XP_010917630.1| | PREDICTED: calmodulin-like protein 11 [Elaeis guineensis] | 3.0e-21 |
| pfu_aug2.0_27.1_23262.t1 | gi|720075341|ref|XP_010279286.1| | PREDICTED: calmodulin-like protein 11 [Nelumbo nucifera] | 5.0e-21 |
| pfu_aug2.0_27.1_23262.t1 | gi|672134957|ref|XP_008791135.1| | PREDICTED: calmodulin-like protein 8 [Phoenix dactylifera] | 1.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23262.t1 atgatggcgaagaagatgatggagggtgaccttgagaatgagatccgagaagcgttcacgctgtttgatacggacagaag tggttccattactaaagatgaactgtataatgttataatgaatcatggccataagtttactgatgaagaagccaaacagc tgatcagcgaagctgacaaagatggtgatgggagggttaattacgaagagtttttgagtgtggtgtgtccatcagagaga gtaacgacacatctgtga |
|
Protein
| Protein ID | pfu_aug2.0_27.1_23262.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23262.t1 MMAKKMMEGDLENEIREAFTLFDTDRSGSITKDELYNVIMNHGHKFTDEEAKQLISEADKDGDGRVNYEEFLSVVCPSER VTTHL |
|