Gene
| Gene Model ID | pfu_aug2.0_27.1_23263 |
|---|---|
| Locus | scaffold27.1 : 131666 ... 141605 : - |
| To GenomeBrowser | scaffold27.1:131666..141605 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_19636.1_40167 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0000086 GO:0000922 GO:0001975 GO:0002027 GO:0002576 GO:0005509 GO:0005513 GO:0005654 GO:0005813 GO:0005829 GO:0005876 GO:0005886 GO:0005980 GO:0006006 GO:0007005 GO:0007173 GO:0007190 GO:0007202 GO:0007268 GO:0008179 GO:0008543 GO:0009405 GO:0010800 GO:0010801 GO:0010881 GO:0016301 GO:0019901 GO:0019904 GO:0021762 GO:0022400 GO:0030017 GO:0030168 GO:0030235 GO:0030426 GO:0031432 GO:0031800 GO:0031954 GO:0031996 GO:0031997 GO:0032465 GO:0032516 GO:0034704 GO:0035307 GO:0038095 GO:0043274 GO:0043539 GO:0043548 GO:0043647 GO:0044325 GO:0045087 GO:0046209 GO:0048010 GO:0048011 GO:0048306 GO:0050998 GO:0051000 GO:0051343 GO:0051412 GO:0060315 GO:0060316 GO:0061024 GO:0070062 GO:0071902 GO:0072542 GO:1901339 GO:1901841 GO:1901844 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23263.t1 | 2 | 1 | EFhand_Ca_insen | 11 | 31 | 4.0e-06 | 26.7 | 0.71 | 750.0 | 0.2 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 1 | EF-hand_1 | 17 | 33 | 2.3e-23 | 79.6 | 4.5e-07 | 0.00048 | 19.2 |
| pfu_aug2.0_27.1_23263.t1 | 2 | 1 | EF-hand_7 | 17 | 31 | 1.5e-20 | 73.0 | 0.00094 | 0.99 | 9.5 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 1 | EF-hand_6 | 18 | 32 | 7.1e-17 | 59.7 | 0.00021 | 0.22 | 11.4 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 1 | EF-hand_5 | 18 | 31 | 6.2e-13 | 47.4 | 0.0012 | 1.3 | 8.4 |
| pfu_aug2.0_27.1_23263.t1 | 2 | 1 | EF-hand_8 | 19 | 60 | 4.4e-21 | 74.2 | 7.3e-10 | 7.8e-07 | 28.6 |
| pfu_aug2.0_27.1_23263.t1 | 2 | 2 | EFhand_Ca_insen | 39 | 104 | 4.0e-06 | 26.7 | 1.7e-08 | 1.8e-05 | 24.6 |
| pfu_aug2.0_27.1_23263.t1 | 2 | 2 | EF-hand_7 | 43 | 103 | 1.5e-20 | 73.0 | 2.3e-21 | 2.4e-18 | 65.9 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 2 | EF-hand_1 | 44 | 71 | 2.3e-23 | 79.6 | 4.7e-11 | 5.0e-08 | 31.7 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 2 | EF-hand_6 | 44 | 72 | 7.1e-17 | 59.7 | 3.9e-11 | 4.1e-08 | 32.4 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 2 | EF-hand_5 | 44 | 68 | 6.2e-13 | 47.4 | 1.9e-06 | 0.002 | 17.3 |
| pfu_aug2.0_27.1_23263.t1 | 2 | 2 | EF-hand_8 | 57 | 105 | 4.4e-21 | 74.2 | 5.1e-18 | 5.4e-15 | 54.7 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 3 | EF-hand_1 | 79 | 105 | 2.3e-23 | 79.6 | 4.0e-11 | 4.3e-08 | 31.9 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 3 | EF-hand_5 | 84 | 103 | 6.2e-13 | 47.4 | 1.0e-07 | 0.00011 | 21.3 |
| pfu_aug2.0_27.1_23263.t1 | 3 | 3 | EF-hand_6 | 85 | 105 | 7.1e-17 | 59.7 | 1.0e-05 | 0.011 | 15.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23263.t1 | gi|676461804|ref|XP_009056061.1| | hypothetical protein LOTGIDRAFT_216207 [Lottia gigantea] | 5.0e-34 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23263.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23263.t1 atgacacaagtacaagtttgcaaagaaaactttacagaggagcaaattgaaggtaatggtgaaattgattttgacgaatt tctgaccatgatggcgaagaagcagaacgccattgacgccgaggatcagatcagggaagcgtttaaggtatttgacaagg acaatctagggtacataactgcgtcagaactccgccgtataatgacgaccctgggagacaagctgccggacgaggaggtg gacgagatgatagaggaagtggacttggacggggacgggaaaattgattatttagagtttacaacaatgctggcaggagg aatgaaatcataa |
|
Protein
| Protein ID | pfu_aug2.0_27.1_23263.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23263.t1 MTQVQVCKENFTEEQIEGNGEIDFDEFLTMMAKKQNAIDAEDQIREAFKVFDKDNLGYITASELRRIMTTLGDKLPDEEV DEMIEEVDLDGDGKIDYLEFTTMLAGGMKS |
|