Gene
| Gene Model ID | pfu_aug2.0_27.1_23264 |
|---|---|
| Locus | scaffold27.1 : 144576 ... 154735 : - |
| To GenomeBrowser | scaffold27.1:144576..154735 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_14648.1_61391 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23264.t1 | 2 | 1 | XK-related | 149 | 413 | 0.0 | 191.1 | 0.0 | 1.12104e-44 | 152.8 |
| pfu_aug2.0_27.1_23264.t1 | 2 | 2 | XK-related | 472 | 557 | 0.0 | 191.1 | 1.6e-15 | 1.2e-11 | 44.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23264.t1 | gi|391347797|ref|XP_003748140.1| | PREDICTED: XK-related protein 6-like [Metaseiulus occidentalis] | 5.0e-22 |
| pfu_aug2.0_27.1_23264.t1 | gi|644999810|ref|XP_008215720.1| | PREDICTED: XK-related protein 6 [Nasonia vitripennis] | 2.0e-18 |
| pfu_aug2.0_27.1_23264.t1 | gi|512905832|ref|XP_004926043.1| | PREDICTED: XK-related protein 6 [Bombyx mori] | 2.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23264.t1 atgtcggaggcaattgagcataaagagggagaaacgactgaaagtgaaagacaacttcctgatttctcagatatggatct aaaagctagtatcatacacaggggatcgtacagggacgaggcaggggacaatgaggattgtaaggtacgagctgggatgg ttaggagacagatctctatagaacctgaggaggtatcccagctaacactgagtaaggagtcctcgccggacggagcactc catgccgttactgaaaacgaccagccccagcctggtgatgacacagacgtgggggcagggcggccggcaaggtcaaacgg taccaccgacaagtactttcaagagaagcagaaacccatacgaaaactatgctgcttcaaaatttatgaaaaggggactg acccgcacgctaaatggccgcctaaattccacattagggacggattattaggattgtgggcactgtttactttcgctttt gactatggcactgatattagactgatggtagagtactacttaaatcaggagttccagtattttttcctgaccctggggtt tattgccgtgccctccttcatatcgggtgtgatatcagtaatttggtataaaatgacatacaagcgagacctgaagtatg gatataaacacgctaagacactgtattacgctaggatggtattttctttcattcagctgggacgaatattcagacaattg gagtatatctattgcatatttaatacactgaaactggaacgtgagatccagaaattggaaaaagcacagccaaagaacaa ggctgagatcataaaactgaaaagggaggtgttcggtctgaggaaaactgctacggcggagaaacgagacgctgccatac tgggacttatagatggttttatggagtcggctttacagttaatgcttcaactatacctaacagtcagcctgaacctacca ttgggttttcccagagtgtcatcccttgtatcgtcctgggtatccacggctttaatccagacttcttactacagagcaaa taggaaggccaacaaggacaagttcaactccgatgacgtgtcgtccatactctacttcctgtggagatttgtggagctag gacctcgctacatcgtcctcatcctaaccttgtattacttccagccttggtgtgtcatcttcatcttgctacatgttatt ttcgtgacggccctgtaccttagagatggtccagagttggagggaatctgcacccagccgctggaggaaagtgagaggac tgaccagaaacgtctgctcgaggtatcactgtcggctgctgaccagaccggagtagcagacgatactattacagacgaca ctggcaggatgaatgacgcttctcctaagggatgctcgttcccatgggtgatgtctaaagcttttatttgtctaatgggt tttgtcggagttttgtcattcgttaaccttaaggaaggtaaaactaagaagacagcatttgttttctacattgtttatta tctagagaacattgtaatggtggctctcatcctatggtactctctgtcatataatatggtaacgggctgggtatattgtt tgtttgctgtaccagttggtatggtactacacgtagtgcttgtttctctcttctacgtgctctttcatcccgccaattcc attctcccgccttataaatggttctgctgttgtaaaccttccaaagaggaacctgtcacagagatttacagtgtgtattt gtggagaagtttctcctttgtattatggcaagctgtagtatga |
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Protein
| Protein ID | pfu_aug2.0_27.1_23264.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23264.t1 MSEAIEHKEGETTESERQLPDFSDMDLKASIIHRGSYRDEAGDNEDCKVRAGMVRRQISIEPEEVSQLTLSKESSPDGAL HAVTENDQPQPGDDTDVGAGRPARSNGTTDKYFQEKQKPIRKLCCFKIYEKGTDPHAKWPPKFHIRDGLLGLWALFTFAF DYGTDIRLMVEYYLNQEFQYFFLTLGFIAVPSFISGVISVIWYKMTYKRDLKYGYKHAKTLYYARMVFSFIQLGRIFRQL EYIYCIFNTLKLEREIQKLEKAQPKNKAEIIKLKREVFGLRKTATAEKRDAAILGLIDGFMESALQLMLQLYLTVSLNLP LGFPRVSSLVSSWVSTALIQTSYYRANRKANKDKFNSDDVSSILYFLWRFVELGPRYIVLILTLYYFQPWCVIFILLHVI FVTALYLRDGPELEGICTQPLEESERTDQKRLLEVSLSAADQTGVADDTITDDTGRMNDASPKGCSFPWVMSKAFICLMG FVGVLSFVNLKEGKTKKTAFVFYIVYYLENIVMVALILWYSLSYNMVTGWVYCLFAVPVGMVLHVVLVSLFYVLFHPANS ILPPYKWFCCCKPSKEEPVTEIYSVYLWRSFSFVLWQAVV |
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