Gene
| Gene Model ID | pfu_aug2.0_27.1_23268 |
|---|---|
| Locus | scaffold27.1 : 254565 ... 264843 : + |
| To GenomeBrowser | scaffold27.1:254565..264843 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_27305.1_19172 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cysteine protease atg4d | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23268.t1 | 1 | 1 | Peptidase_C54 | 197 | 495 | 0.0 | 340.0 | 0.0 | 0.0 | 339.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23268.t1 | gi|585695569|ref|XP_006822046.1| | PREDICTED: cysteine protease ATG4D-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_27.1_23268.t1 | gi|524902973|ref|XP_005107706.1| | PREDICTED: uncharacterized protein LOC101850510 [Aplysia californica] | 0.0 |
| pfu_aug2.0_27.1_23268.t1 | gi|156396522|ref|XP_001637442.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_27.1_23268.t1 | gi|759033543|ref|XP_011329182.1| | PREDICTED: cysteine protease ATG4D isoform X2 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_27.1_23268.t1 | gi|759033541|ref|XP_011329174.1| | PREDICTED: cysteine protease ATG4D isoform X1 [Cerapachys biroi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23268.t1 atgatcctagatccatcaaaattgactacaatccccgatccctcacggaataaacccaataacgaagaggatctaataga tgtgatatttcatgcagatagagaccagttctatattgaaaatgatgtagagattgactatccgtattcaagttttgtaa atgatgcaggaccatgttattcaagtttaccagaaacatttaatagtcaaccatctttatggttatcaaatccctcaata cagcaggagtcacattctgcggaaaggcatactgctaccagtataccaaatggactttattcttggccttcctctgaaag cattggagccagaacttttcctcctagacataaacttgttcctactaaaatgacaaatactcaaactctagaagatggtg ttgatcaaacagaacgaatgaaaaacaaagtgaaatcctttctgaataatatgaaatatggttggaccataaagacaaaa acatcatttagatttgatagtcctatttggatgctaggagaatgttatcatattcgaccaagtgacattgatgctgtgcc aggtaatatcaccagaagaatgccaactatagaaaagttcaagcagcagttttgtagtcttctttggttcacttatcgtc aggactttcctgcgatccctggaacaaaactgaccactgactgtggatggggctgcatgcttcgtagcggtcagatgatg ttggcaaaggcattcagtatacactatctgggcagagactggaatgtcttcagcaatcagactcgagagcaagacacata tcgtaaacagattattcgatggtttggtgattaccccagcgaagagagtccatttggcatgcacaagttggtagaggttg gaaaatcccatggtaaacagcctggtgaatggtacggcccgtcatctgtggctcatatattcaaggctactatgaacaga ggctacagttcccagattgttctaacggatatctgtatttatgtagctcaggattgtactgtgtacaaacaagatattta caatatgtgctgtagcagagtgagatcagagacaaggttcacgagttccagtgagtcaaatgcagcaccctctagtgcag attgttccctgggagagtggcagagagccgttgtcatattcattcctgtgcggcttggtggagaggaactcaacccactt tacattccatgtattaaaagtttgttagctcaagattcatgtataggcattataggaggaaaaccaaaacattcactcta ctttgtaggatggcaagaggagaagctgatatatttggatccccattactgccaggatgctgtagacaccagagaaagag atttccccatacagtcatttcactgcctttctccaagaaaactatctgtgagcaagatggatcccagttgtacaataggt ttttactgtaggactagagcagattttgaaaaatttgtagttcatgtagaggagatggtgtcccctccaaagcagaaact gtcatatcccatgtttgtatttagtgacggtgaaagtgaagatgtcatgtatgatgactttaaacaagaaaaagacaaag ttttacgaattagacatgtgcgtatagacagtgaaggcagggtgcgttcggagactctggaatcagaggaatttgttgta ctgtga |
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Protein
| Protein ID | pfu_aug2.0_27.1_23268.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23268.t1 MILDPSKLTTIPDPSRNKPNNEEDLIDVIFHADRDQFYIENDVEIDYPYSSFVNDAGPCYSSLPETFNSQPSLWLSNPSI QQESHSAERHTATSIPNGLYSWPSSESIGARTFPPRHKLVPTKMTNTQTLEDGVDQTERMKNKVKSFLNNMKYGWTIKTK TSFRFDSPIWMLGECYHIRPSDIDAVPGNITRRMPTIEKFKQQFCSLLWFTYRQDFPAIPGTKLTTDCGWGCMLRSGQMM LAKAFSIHYLGRDWNVFSNQTREQDTYRKQIIRWFGDYPSEESPFGMHKLVEVGKSHGKQPGEWYGPSSVAHIFKATMNR GYSSQIVLTDICIYVAQDCTVYKQDIYNMCCSRVRSETRFTSSSESNAAPSSADCSLGEWQRAVVIFIPVRLGGEELNPL YIPCIKSLLAQDSCIGIIGGKPKHSLYFVGWQEEKLIYLDPHYCQDAVDTRERDFPIQSFHCLSPRKLSVSKMDPSCTIG FYCRTRADFEKFVVHVEEMVSPPKQKLSYPMFVFSDGESEDVMYDDFKQEKDKVLRIRHVRIDSEGRVRSETLESEEFVV L |
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