Gene
| Gene Model ID | pfu_aug2.0_27.1_23270 |
|---|---|
| Locus | scaffold27.1 : 276605 ... 295660 : + |
| To GenomeBrowser | scaffold27.1:276605..295660 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_17850.1_25668 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein tilb homolog | GO:0005515 GO:0005737 GO:0005929 GO:0008584 GO:0030317 GO:0036158 GO:0036159 GO:0044458 GO:0060287 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23270.t1 | 1 | 1 | LRR_9 | 8 | 104 | 1.3e-10 | 41.1 | 2.5e-13 | 3.7e-10 | 39.6 |
| pfu_aug2.0_27.1_23270.t1 | 2 | 1 | LRR_4 | 10 | 52 | 8.2e-11 | 41.2 | 4.5e-09 | 6.6e-06 | 25.6 |
| pfu_aug2.0_27.1_23270.t1 | 2 | 1 | LRR_8 | 11 | 67 | 3.4e-07 | 29.9 | 6.5e-10 | 9.6e-07 | 28.4 |
| pfu_aug2.0_27.1_23270.t1 | 2 | 2 | LRR_4 | 47 | 73 | 8.2e-11 | 41.2 | 1.7e-06 | 0.0025 | 17.3 |
| pfu_aug2.0_27.1_23270.t1 | 2 | 2 | LRR_8 | 48 | 89 | 3.4e-07 | 29.9 | 0.00024 | 0.36 | 10.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23270.t1 | gi|657575294|ref|XP_008291387.1| | PREDICTED: protein tilB homolog [Stegastes partitus] | 0.0 |
| pfu_aug2.0_27.1_23270.t1 | gi|260829973|ref|XP_002609936.1| | hypothetical protein BRAFLDRAFT_85884 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_27.1_23270.t1 | gi|578815913|ref|XP_006716601.1| | 0.0 | |
| pfu_aug2.0_27.1_23270.t1 | gi|403284812|ref|XP_003933749.1| | PREDICTED: protein tilB homolog [Saimiri boliviensis boliviensis] | 0.0 |
| pfu_aug2.0_27.1_23270.t1 | gi|119612549|gb|EAW92143.1| | leucine rich repeat containing 6, isoform CRA_a [Homo sapiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23270.t1 atggttcgaaaaaatgttgcaaagttgaaaaaattagaatacctcaatttagctctgaacaatgtggaaagaatagaaaa tcttgagaattgtgaatccttaaagaaattagatttaactgtaaacttcataggagaattgaccagtatagaaaatctaa aaggacttgtacatcttacagaactgtacttgactggtaatccatgtacagaatatgacggttacagaaaatatgtcgta gcaactctacctcaacttcagtatctagatggaactcaagtagagaaatcggaaagaatcttagcacaacaggacttggg agtgattaaaggctacatcattgagcagcaaaacagacatcggaaaaaaagagaaaaggagaaagaacaaataaagcagc atgaagaaaagaaaaataaaaagaatcaaagtgaaagtacaaataaagatgggacatggtacactaatatcaacaacagc gatgagggagtggaacaaaaggatgaggcagaatctgaatgtaaaaattgtgaacaagaaaggatagcggaaaatggtaa cacaaatcaggggcaggtaattgtggaggatgtggaggagaacgaagaagatgacaatgatgatgaaatgacagaagaaa aagacaaggaggatggtcagtatgaatggctcatacattatactaacatcaaacttgtagggatggtcaggcatgatgag acccatcaccatacaagaatcaaggtcaaggtcttgtgtagagtcaaatatgagacaggcaacgtactagttcttaaaca gcctagtactttcagtgctggtgacatagtggacttgggagtgattaaaggatacatcattgagcagcaaaacagacatc ggaaaaaaagagaaaaggagaaagaacaaataaagcagcatgaagaaaagaaaaataaaaagaatcaaagtgaaagtaca aataaagatgggacgtggtacactaatatcaacaacagattttgggaggaaaaggtaccgtttacaccagaatctcgagt agctgtccatgaacacatgaaaaaggtcaaagaaaaggaagacaagaaaaaacacatggatacatctttaattgactgtg atgtgcaaccaaactatgtcagagtgaccttaaagggaaaggtttttcagcttcatttaggtgaagatgtgaatccagat tccagtacagcaaaaagatctcagataacaggaaacctactggtcaccatgcccaaagcaaaacaagtgataaaaccaaa gaaaatagagaataaaaaagtacacaacaaagagaatgttgaaaagcaaaagaggccaaaggaagagagacttgaagttg atgaatctgcacgcaagactgtcgatttgggtaacattgtatcagaaaagactgctgatattgtgcctccgttaggacat agaaataataagtttcaagtgaaggaacgggaaaatagcgcagactttattgacgatcctgatgtaccaccactggaatg a |
|
Protein
| Protein ID | pfu_aug2.0_27.1_23270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23270.t1 MVRKNVAKLKKLEYLNLALNNVERIENLENCESLKKLDLTVNFIGELTSIENLKGLVHLTELYLTGNPCTEYDGYRKYVV ATLPQLQYLDGTQVEKSERILAQQDLGVIKGYIIEQQNRHRKKREKEKEQIKQHEEKKNKKNQSESTNKDGTWYTNINNS DEGVEQKDEAESECKNCEQERIAENGNTNQGQVIVEDVEENEEDDNDDEMTEEKDKEDGQYEWLIHYTNIKLVGMVRHDE THHHTRIKVKVLCRVKYETGNVLVLKQPSTFSAGDIVDLGVIKGYIIEQQNRHRKKREKEKEQIKQHEEKKNKKNQSEST NKDGTWYTNINNRFWEEKVPFTPESRVAVHEHMKKVKEKEDKKKHMDTSLIDCDVQPNYVRVTLKGKVFQLHLGEDVNPD SSTAKRSQITGNLLVTMPKAKQVIKPKKIENKKVHNKENVEKQKRPKEERLEVDESARKTVDLGNIVSEKTADIVPPLGH RNNKFQVKERENSADFIDDPDVPPLE |
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