Gene
| Gene Model ID | pfu_aug2.0_27.1_23272 |
|---|---|
| Locus | scaffold27.1 : 321758 ... 331878 : - |
| To GenomeBrowser | scaffold27.1:321758..331878 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_16170.1_10900 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23272.t1 | 2 | 1 | Geminin | 13 | 192 | 1.6e-18 | 67.1 | 3.2e-22 | 1.6e-18 | 67.1 |
| pfu_aug2.0_27.1_23272.t1 | 2 | 2 | Geminin | 232 | 279 | 1.6e-18 | 67.1 | 0.72 | 3600.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23272.t1 | gi|269785253|ref|NP_001161554.1| | geminin-like protein [Saccoglossus kowalevskii] | 3.0e-17 |
| pfu_aug2.0_27.1_23272.t1 | gi|617385402|ref|XP_007547808.1| | PREDICTED: geminin [Poecilia formosa] | 4.0e-16 |
| pfu_aug2.0_27.1_23272.t1 | gi|658874536|ref|XP_008420247.1| | PREDICTED: geminin [Poecilia reticulata] | 3.0e-15 |
| pfu_aug2.0_27.1_23272.t1 | gi|657805497|ref|XP_008329897.1| | PREDICTED: geminin [Cynoglossus semilaevis] | 6.0e-15 |
| pfu_aug2.0_27.1_23272.t1 | gi|551491712|ref|XP_005797426.1| | PREDICTED: geminin-like [Xiphophorus maculatus] | 6.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23272.t1 atggcaagcacgacagaatcagtgtcgcaagaaaattgtcccttgaataacgtcaagacgaaaaaaacttgtgagccaat tgtgcagaacagaaagactttacaagtacttcaggtttcagcaaatgacaatcagatactggtaggaaaagacaacatta ttacagcaaagaatgagaaaggaaagagtaattctcacctaaagaagatagttccaaaacaaaaacctgtttcagtattt gaggatccagctgagcatctccgaaggaaatcctatgatgacaaggccgtacagacggagaaggaaagaatgaagagatt atctgaggcaggggaagacatcgatccagaagtatttgaacttatggttcaagaggaggtacctgaaagttactggaagg aagtagctgagcagaggcgggtggccctgaatgattccttacatgagaatgaaatgctccacaaggagatagaggatctg aaggatgagaatagtaagctgacagtgatggccagtaaggcagattactttgctgatgttatacagggaatgcttgatga tcagtcagaagaagataaacctgtcacagatacagaggacagtaaagatgttgagtcggaaaaatgtgacaaaacagatg ttgaacctcagctcgtagataattgtgaaaattgtcaaaatgcttgtgaaaacgatttagaagtagttgatgtgaaaaag gaatccagtcaccttgcagaagaacttagcaaagactctgcatcaattcaagatgataatgaagaagtgacaagctcaga gacaaaaaataaacttgatagtctagagtcaagtgaggagaaaagccccagaagaacttatgaagaatgtgacacggaga gcagtaaggaagtaattgagaaagctgtcagtgagcaatgtcatacagtagaggagagagaaaattcaaaggaaaaagga aatgagtga |
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Protein
| Protein ID | pfu_aug2.0_27.1_23272.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23272.t1 MASTTESVSQENCPLNNVKTKKTCEPIVQNRKTLQVLQVSANDNQILVGKDNIITAKNEKGKSNSHLKKIVPKQKPVSVF EDPAEHLRRKSYDDKAVQTEKERMKRLSEAGEDIDPEVFELMVQEEVPESYWKEVAEQRRVALNDSLHENEMLHKEIEDL KDENSKLTVMASKADYFADVIQGMLDDQSEEDKPVTDTEDSKDVESEKCDKTDVEPQLVDNCENCQNACENDLEVVDVKK ESSHLAEELSKDSASIQDDNEEVTSSETKNKLDSLESSEEKSPRRTYEECDTESSKEVIEKAVSEQCHTVEERENSKEKG NE |
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