Gene
| Gene Model ID | pfu_aug2.0_27.1_23277 |
|---|---|
| Locus | scaffold27.1 : 470419 ... 488259 : + |
| To GenomeBrowser | scaffold27.1:470419..488259 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_110426.1_28191 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| peptidylprolyl isomerase domain and wd repeat-containing protein 1 | GO:0005634 GO:0016853 GO:0044267 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23277.t1 | 4 | 1 | WD40 | 57 | 87 | 3.0e-16 | 58.5 | 2.1e-08 | 0.00031 | 20.5 |
| pfu_aug2.0_27.1_23277.t1 | 4 | 2 | WD40 | 96 | 132 | 3.0e-16 | 58.5 | 4.5e-07 | 0.0066 | 16.2 |
| pfu_aug2.0_27.1_23277.t1 | 4 | 3 | WD40 | 194 | 222 | 3.0e-16 | 58.5 | 0.86 | 13000.0 | -3.7 |
| pfu_aug2.0_27.1_23277.t1 | 4 | 4 | WD40 | 254 | 280 | 3.0e-16 | 58.5 | 1.8e-07 | 0.0026 | 17.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23277.t1 | gi|602626458|ref|XP_007420186.1| | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1-like, partial [Python bivittatus] | 0.0 |
| pfu_aug2.0_27.1_23277.t1 | gi|731244810|ref|XP_010635543.1| | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X3 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_27.1_23277.t1 | gi|507575422|ref|XP_004671256.1| | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1 [Jaculus jaculus] | 0.0 |
| pfu_aug2.0_27.1_23277.t1 | gi|530622889|ref|XP_005301043.1| | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_27.1_23277.t1 | gi|348551650|ref|XP_003461643.1| | PREDICTED: peptidylprolyl isomerase domain and WD repeat-containing protein 1 [Cavia porcellus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23277.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23277.t1 atggaaaattctgccctaaaacgcacaaaagaggagttaaacgaagattcagacgagtggataggtcctcttcctgtcga ggctgctaaacctaagaagagaaaagttcttgaatttgagcaagtttatttggacaatctaccaaatgctgagtcctatg aaaaaagttacatgcacagagatgtggtcactcacttagctgtttcaaagacagatttcattgtgacagcaagctgtgat ggtcatgttaaattctggaaaaaggcagaggaagaaggaattgaatttgtgaaacactttagagcccatttaggtacaat aatggaccttggaatgagcaacaatggagaattctgttgtacaatatctgatgacaaatctgccaaaatatttgatgttg tcaattttgacatgatcacaatgttgaagctgtccttcacgccattaagttgtggttggctgtataattcaggggatgcc actccagcattagctatatctgaaaaagacagtggtgctatccatatctttgatggtagaggagggagcaatgacccgat acataatacaggaaaacttcacatgaaacctgtcacacttataaggtacaatactccttatgaggtagcagtctcagttg attccagcggaatgatagaattctggacaggaccaaaatcatcatacgggttcccaagaaacgtccaatgggaatacaaa acagatacagatctctatgagtttgccaagtgtaaaacaacagtttgtgacctcagtttttctccagatggaaaaatgat ggcaacaatagcaaaggacaggaaggtcagaatatttaaatttcttaccggaaaattatccaaagttttagacgagtctt tacagcagtttacagaattacaacagatgaaacagcagttacccaacatggagtttggtagacggctggcagtggagagg gatctggagaaacatgaggcttttggtagatgtaacatagtttttgatgatagtggtcattttgccctatattcaacaat gttaggaatcaaagtgataaatttacatacaaatcgatgtatgagaattatcggtaagcctgagaatgcacgttttctcc acatcagcctattccaaggaacgggtaaaaagctgaaagctgccgtagacgtggaaatggcagcctcagataacccactg cttcagaatgtgacctttgaccccacactgatatgtactgcattcaagaagaacaggttttatttatttacaaggagaga gccagaggacactaaaagtgctgacacagagagggatgtgtttaatgagaaaccttcaaaagaagacatggttgctgcta ctcaagatgatgggcttcacaggacaccggagaaggggaactgcaagatgagaatagtcagaaatgttaaggatgtagtt gattttttcaccgtaggaatcctagtggtcagtatctacatgctaatgctcttcctaaatcagaacatagtgatatcaga cctagagaaggtatgggaccgggagaaaacaaccgtcacagactctatacatagatacacgacagtcagatcgcccatca gcggtcccagacgtatggtccattctgtgtcttgtgcacgcatcatagaaggtgacaaattagagatacaaaaggccaaa atcatcacacacaactctaacagtatctcagatttggaatatgtgaatttaactcgaaattgcgcggatttcaaaatgtt acaagggtttgaaaatcgtctatacaacaacttggagaaaacattccccttagctttcacaatacttnccttattgaatg gagtaaggacatag |
|
Protein
| Protein ID | pfu_aug2.0_27.1_23277.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23277.t1 MENSALKRTKEELNEDSDEWIGPLPVEAAKPKKRKVLEFEQVYLDNLPNAESYEKSYMHRDVVTHLAVSKTDFIVTASCD GHVKFWKKAEEEGIEFVKHFRAHLGTIMDLGMSNNGEFCCTISDDKSAKIFDVVNFDMITMLKLSFTPLSCGWLYNSGDA TPALAISEKDSGAIHIFDGRGGSNDPIHNTGKLHMKPVTLIRYNTPYEVAVSVDSSGMIEFWTGPKSSYGFPRNVQWEYK TDTDLYEFAKCKTTVCDLSFSPDGKMMATIAKDRKVRIFKFLTGKLSKVLDESLQQFTELQQMKQQLPNMEFGRRLAVER DLEKHEAFGRCNIVFDDSGHFALYSTMLGIKVINLHTNRCMRIIGKPENARFLHISLFQGTGKKLKAAVDVEMAASDNPL LQNVTFDPTLICTAFKKNRFYLFTRREPEDTKSADTERDVFNEKPSKEDMVAATQDDGLHRTPEKGNCKMRIVRNVKDVV DFFTVGILVVSIYMLMLFLNQNIVISDLEKVWDREKTTVTDSIHRYTTVRSPISGPRRMVHSVSCARIIEGDKLEIQKAK IITHNSNSISDLEYVNLTRNCADFKMLQGFENRLYNNLEKTFPLAFTILXLLNGVRT |
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