Gene
| Gene Model ID | pfu_aug2.0_27.1_23282 |
|---|---|
| Locus | scaffold27.1 : 575336 ... 582442 : - |
| To GenomeBrowser | scaffold27.1:575336..582442 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_3058.1_51863 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related and estrogen-regulated growth inhibitor | GO:0005525 GO:0007264 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23282.t1 | 1 | 1 | Ras | 11 | 159 | 1.7e-28 | 99.0 | 2.8e-32 | 2.1e-28 | 98.7 |
| pfu_aug2.0_27.1_23282.t1 | 1 | 1 | Miro | 29 | 112 | 7.0e-12 | 45.8 | 1.4e-15 | 1.1e-11 | 45.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23282.t1 | gi|676490755|ref|XP_009065373.1| | hypothetical protein LOTGIDRAFT_229706 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_27.1_23282.t1 | gi|383858285|ref|XP_003704632.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor [Megachile rotundata] | 0.0 |
| pfu_aug2.0_27.1_23282.t1 | gi|644997980|ref|XP_008203625.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_27.1_23282.t1 | gi|340716847|ref|XP_003396904.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor isoform X2 [Bombus terrestris] | 0.0 |
| pfu_aug2.0_27.1_23282.t1 | gi|571539599|ref|XP_006565174.1| | PREDICTED: ras-related and estrogen-regulated growth inhibitor-like isoform X1 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23282.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23282.t1 atgcccgggagaagtaagcatcccctgattgctttgtctgttagattcctcacgaaaagattcataggagaatacgacca aagtgcagaatccaaatacaaatatacaacaaatgttgacggagaaactatgatatttgaagttctcgataccgtttcag agaatgaggattgcggagctagagacgatgttctacgatggacagactgtataatgttagtatactcagtggtcagtcgg aagtcctttgacgctattcccgaacttaagaaaactatagaggagagtcggaaaggtgcaagcattccaatgattctgat tggcaacaaaagagatcttgcgcacatgcgcgaagtttcaactgaagagggtgaaaagttggcgttagaatacggatgtc cgtttctggaagtgtccgcgtcagaagatgttgatacagtgacagaggcatttcacaaagtctcacgagaagtgatagaa ttcaaacgaaggtcaaggacttttatagacagagtgtttggtgcatttggacttgaaaaatccactacatag |
|
Protein
| Protein ID | pfu_aug2.0_27.1_23282.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23282.t1 MPGRSKHPLIALSVRFLTKRFIGEYDQSAESKYKYTTNVDGETMIFEVLDTVSENEDCGARDDVLRWTDCIMLVYSVVSR KSFDAIPELKKTIEESRKGASIPMILIGNKRDLAHMREVSTEEGEKLALEYGCPFLEVSASEDVDTVTEAFHKVSREVIE FKRRSRTFIDRVFGAFGLEKSTT |
|