Gene
| Gene Model ID | pfu_aug2.0_27.1_23286 |
|---|---|
| Locus | scaffold27.1 : 651871 ... 665852 : - |
| To GenomeBrowser | scaffold27.1:651871..665852 |
| Genes list of scaffold | scaffold27.1 |
| Synonym | pfu_aug1.0_98740.1_71490 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| staphylococcal nuclease domain-containing protein 1-like | GO:0005737 GO:0043170 GO:0043227 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_27.1_23286.t1 | 5 | 1 | SNase | 36 | 153 | 0.0 | 195.5 | 6.2e-13 | 3.1e-09 | 37.0 |
| pfu_aug2.0_27.1_23286.t1 | 5 | 2 | SNase | 207 | 315 | 0.0 | 195.5 | 3.2e-18 | 1.6e-14 | 54.0 |
| pfu_aug2.0_27.1_23286.t1 | 5 | 3 | SNase | 357 | 415 | 0.0 | 195.5 | 0.0011 | 5.7 | 7.2 |
| pfu_aug2.0_27.1_23286.t1 | 5 | 4 | SNase | 495 | 602 | 0.0 | 195.5 | 3.6e-24 | 1.8e-20 | 73.2 |
| pfu_aug2.0_27.1_23286.t1 | 1 | 1 | TUDOR | 621 | 738 | 1.4e-28 | 99.2 | 5.1e-32 | 2.5e-28 | 98.3 |
| pfu_aug2.0_27.1_23286.t1 | 5 | 5 | SNase | 779 | 833 | 0.0 | 195.5 | 7.0e-07 | 0.0035 | 17.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_27.1_23286.t1 | gi|676484886|ref|XP_009063486.1| | hypothetical protein LOTGIDRAFT_235720 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_27.1_23286.t1 | gi|390345566|ref|XP_798852.3| | PREDICTED: staphylococcal nuclease domain-containing protein 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_27.1_23286.t1 | gi|585644059|ref|XP_002732557.2| | PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_27.1_23286.t1 | gi|524886963|ref|XP_005100071.1| | PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_27.1_23286.t1 | gi|156391813|ref|XP_001635744.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_27.1_23286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23286.t1 atggcctcaaaagtaaaaaaaaaaataaaaaaaatagaagtattatctggagatgcagtggtaataaggggccaacctaa aggaggtccaccaccagagaagacgatatgcttctccaacattaccgcccctcgtatggctcgtcgtccaaaccccatga cagataccacagaaaccaaagatgagccctttgcctgggaagccagagaatatgtgagaaagaagctgataaacaaagaa gtggcatttgtaatagagtatactgtaccagggacaggacgagagtatggctgtgtttatatgggtaaagacactcaagg tgaaaacatcacagagcttttagtggcagagggacttgtagaagtccgtagaggaggacttagacctgatgatccaaatc agcagaagttggtgacatttgaagatgcagccaaatcagctgcaaagggtaaatgggctgctgatgcctcgagtcgtgtg agagatgtcaagtggactgtagaaagtccaaggaattttgtagactctcaccacaacaaaccaatagatgctgtcataga gcatgtaagagatggatgtacagtgagagctttcctcctcccctcctttgactatgtcacagtcatgttgtctggcatta agtgcccaatgttcaaacaagatgagtcgggcaaaaatgtaggtgaaccgtttgcagaggaagccaaatatttcacagaa gttcgattattacaaagagaggtgaaaatcattctagagggtgtttccaaccagaatttactaggaacagttttgcatcc aaatggtaatatagcagagttactgctgagggaggggtttgccaggtgtgtggactggagcatgggtgtggtaacacagg gagctgataaactcagagcagctgaaaaagttgctaaggagaagaagctaagattatggaaggattacaaaccatcagaa tccactattgatgtgaaagacaaaaacttctcaggaaaagtggtagaagtcatcaatggggatgccttaaccataaaaac cagtgatggcaaatcaagaaaagtcttccttgccagtgtgagacccccaagggcacaaggggttgaggcagcaactgagg ggggacaacccaccagagaggcagctaggcgaacacgccccctatatgacattccatacatgtttgaagccagggaattt cttagaaagaaacttatcggaaagaaggtgaacgtgcaagtagattacattcagccagcaaataatagcttccccgagaa aacttgctgtactgttactatatcaggaatcctaagcatcagtgggcgaaggattggcaatagtgataaggatatagcta agtccaagcagttccttccattcttacaaagagctggtagattagaagctgtggtagaatttatagccagtggatcaaga ttacgactctacattcctaaagaaacatgtcttattactttccttgtgtcaggtatcgaatgtcctcgaggaagtagacc aggtccagatggcagcaccattccttcagatgcttttggagaggaggcagcacaattcactaaagagctttgtcttcaga gggaggtagaggtacaagttgagaccatggataaaggtggaaactttattggttttctgtttgtggacaatgtcaacctg tccgtagccctagtggaggaggggctatcgaaggtacacttcacggcagagaggagcaattactacaaacagctacagat tgcagaggaaaatgccaagaaaagaaaagctaatatatggtcaaaatacgaggagccaaaagaggagattgaggtggtag aagataacacagaacgtaatgtagaatacaaacaagtagtggtaacagaagtaggagatgatctgaaattctacgctcaa tatgtagataatggaccacagttagagaagttgatggaacagcttagacaggatatggagaccaatcctcccctcccagg ctcctacacacccaaacgtggagacacttgtgccgccaaattctcagctgataatgaatggtacagagctcgtgtagaaa aggttgaaggaagcaaagttacagtattgtacatcgattatggaaacagggaactaacccaatcaacaaacctggcgaca ttgccggcagcgtatcacacattgagtgctcaggcagtggagtttacactggcttgttcagctctaccaccagatgagga tgccaaatatgatgctctggatgcattttacaatgacatctccaataagcagctcttactaaatgtggagtataagatac taggagcaccgtatgcaagtctgatgtaccccgacacaaaggatgacgtggcacagtcccttatatcaaacggtttcctc ctggtagagaggcgacgggaaaaacgactggcgaaattggtgacagattacatgaaagctcaagaaaaggctaaatcctc aagggttaacctatggaggtacggtgactttacggctgacgatgctaaggaatttggatattctaaatga |
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Protein
| Protein ID | pfu_aug2.0_27.1_23286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_27.1_23286.t1 MASKVKKKIKKIEVLSGDAVVIRGQPKGGPPPEKTICFSNITAPRMARRPNPMTDTTETKDEPFAWEAREYVRKKLINKE VAFVIEYTVPGTGREYGCVYMGKDTQGENITELLVAEGLVEVRRGGLRPDDPNQQKLVTFEDAAKSAAKGKWAADASSRV RDVKWTVESPRNFVDSHHNKPIDAVIEHVRDGCTVRAFLLPSFDYVTVMLSGIKCPMFKQDESGKNVGEPFAEEAKYFTE VRLLQREVKIILEGVSNQNLLGTVLHPNGNIAELLLREGFARCVDWSMGVVTQGADKLRAAEKVAKEKKLRLWKDYKPSE STIDVKDKNFSGKVVEVINGDALTIKTSDGKSRKVFLASVRPPRAQGVEAATEGGQPTREAARRTRPLYDIPYMFEAREF LRKKLIGKKVNVQVDYIQPANNSFPEKTCCTVTISGILSISGRRIGNSDKDIAKSKQFLPFLQRAGRLEAVVEFIASGSR LRLYIPKETCLITFLVSGIECPRGSRPGPDGSTIPSDAFGEEAAQFTKELCLQREVEVQVETMDKGGNFIGFLFVDNVNL SVALVEEGLSKVHFTAERSNYYKQLQIAEENAKKRKANIWSKYEEPKEEIEVVEDNTERNVEYKQVVVTEVGDDLKFYAQ YVDNGPQLEKLMEQLRQDMETNPPLPGSYTPKRGDTCAAKFSADNEWYRARVEKVEGSKVTVLYIDYGNRELTQSTNLAT LPAAYHTLSAQAVEFTLACSALPPDEDAKYDALDAFYNDISNKQLLLNVEYKILGAPYASLMYPDTKDDVAQSLISNGFL LVERRREKRLAKLVTDYMKAQEKAKSSRVNLWRYGDFTADDAKEFGYSK |
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