Gene
| Gene Model ID | pfu_aug2.0_270.1_00523 |
|---|---|
| Locus | scaffold270.1 : 102524 ... 110145 : - |
| To GenomeBrowser | scaffold270.1:102524..110145 |
| Genes list of scaffold | scaffold270.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_270.1_00523.t1 | 1 | 1 | Frag1 | 56 | 270 | 1.6e-32 | 112.7 | 3.8e-36 | 1.9e-32 | 112.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_270.1_00523.t1 | gi|557018349|ref|XP_006009555.1| | PREDICTED: transmembrane protein 150A [Latimeria chalumnae] | 2.0e-21 |
| pfu_aug2.0_270.1_00523.t1 | gi|617632938|ref|XP_007529926.1| | PREDICTED: transmembrane protein 150A [Erinaceus europaeus] | 5.0e-21 |
| pfu_aug2.0_270.1_00523.t1 | gi|505837025|ref|XP_004612082.1| | PREDICTED: transmembrane protein 150A [Sorex araneus] | 5.0e-20 |
| pfu_aug2.0_270.1_00523.t1 | gi|327287110|ref|XP_003228272.1| | PREDICTED: transmembrane protein 150A [Anolis carolinensis] | 7.0e-20 |
| pfu_aug2.0_270.1_00523.t1 | gi|348566423|ref|XP_003469001.1| | PREDICTED: transmembrane protein 150A [Cavia porcellus] | 9.0e-20 |
Transcript
| Transcript ID | pfu_aug2.0_270.1_00523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00523.t1 atggaggtattcgagtcatcaaattctatagcaccatcaagtgtccgaccataccatgatgacgagatgactctggagga aaggggatcaggaagtactgagcaagatcagacaactcatggtggcataaagaaaccaactcggagatgttttattccgc tttggttctatcctcttgcgaccagtatttctattccatttgcatgcattgtttcatacttaatctatttgaactctgtg gaagataaatcgtcctcgtggacggatgattttccttttattagtgacacagggatttatcctcctgcaagctgctggtt tacattgctcttcttcttcgttggattctttagtttctcttcagctttagtccgttatatgcaactgaagactgaatgta ggggtagaagatgtgtcaccatactaaacataataacctttattgcggggtgtacatcatcggttggggtaatcattgtg gctgcctttcagtacgacagaagcttggtcattcatcttgtgggagcaggtttagcatttggagtggcttgtatcttctt catcttacaaactgttatgtccttcctcacacaaaaattacatggaaacattttacatgtaattctaaggatattcaaaa tctttctaaacgtcttccatgtcgtggttgcaataccattcttaattttctcctttgaatatttttgggaagataagtat gagcaaagagaaaaggcagcgatttgtgaatggattttagctttaagtttgagtttatatccactcacaattatacccga agtcaaacaattttcaatgcaaactaaattgaaaaggacctcagaaatggaccatgtaaattgctgtatttatatagaat ga |
|
Protein
| Protein ID | pfu_aug2.0_270.1_00523.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00523.t1 MEVFESSNSIAPSSVRPYHDDEMTLEERGSGSTEQDQTTHGGIKKPTRRCFIPLWFYPLATSISIPFACIVSYLIYLNSV EDKSSSWTDDFPFISDTGIYPPASCWFTLLFFFVGFFSFSSALVRYMQLKTECRGRRCVTILNIITFIAGCTSSVGVIIV AAFQYDRSLVIHLVGAGLAFGVACIFFILQTVMSFLTQKLHGNILHVILRIFKIFLNVFHVVVAIPFLIFSFEYFWEDKY EQREKAAICEWILALSLSLYPLTIIPEVKQFSMQTKLKRTSEMDHVNCCIYIE |
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