Gene
| Gene Model ID | pfu_aug2.0_270.1_00525 |
|---|---|
| Locus | scaffold270.1 : 131637 ... 153735 : - |
| To GenomeBrowser | scaffold270.1:131637..153735 |
| Genes list of scaffold | scaffold270.1 |
| Synonym | pfu_aug1.0_5.1_65171 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_270.1_00525.t1 | 2 | 1 | Ric8 | 67 | 335 | 0.0 | 375.2 | 0.0 | 0.0 | 163.5 |
| pfu_aug2.0_270.1_00525.t1 | 2 | 2 | Ric8 | 334 | 487 | 0.0 | 375.2 | 0.0 | 0.0 | 216.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_270.1_00525.t1 | gi|524867131|ref|XP_005090378.1| | PREDICTED: synembryn-A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_270.1_00525.t1 | gi|524867133|ref|XP_005090379.1| | PREDICTED: synembryn-A-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_270.1_00525.t1 | gi|291239552|ref|XP_002739687.1| | PREDICTED: synembryn-A-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_270.1_00525.t1 | gi|260827148|ref|XP_002608527.1| | hypothetical protein BRAFLDRAFT_126625 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_270.1_00525.t1 | gi|242005184|ref|XP_002423451.1| | synembryn-A, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_270.1_00525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00525.t1 atgagtttgacagaaggacatctaggaactctgcgttctggagaggagcaggaaatatgcaatatccttcacaattttgt agaaaagaatggacagactttcagttttccagaaataacttccagtctcaagcagggtatagtagaagcaataatgaaga aactagataagccagcttcgtcacagtgctatatagcatgtctacagacactgaggctgttcagtcgggagaaggacaag ttagcaagtatgacgactgaaacatcgttagctctggtgatgaagatggcaggtttacaacattacgctcatgaagatgg tgaagttatccaaatacaaaatgacgacccagaggtgatgatagaggcccagaaatgcctgtgtaacctgatttataata gtaaacaagcacaggctgtgtgtagtaaaaatggctgtgtggaaggaataatccaaaggttgaagacttacaaagatcct gaacttaaatatgacataaagttctttgacatgaggatgctatttttgttgactgccctatgctctgacacaagaccaag gatttgttatgacctacatggctttacatacctaatggaggtggtagacctcacactgagggactctgagagcagacaga ccagtctcacagaccaggaggtggacctctgctcagaaattctcaaaatattgtttaacctcacgtccagtatggataaa aataacctagatgaggaggaggaggctcactttatgaggttggtgtgtgtactgagagatctgctcatgtgtaacacctt atctaaagacaagaaagaggaccttcaaagtcacacagtaaacctccttacaaacattcctaaagattgttatgaggagt tattaatacccctgaatgaagcagatataaactgtatagagaacaaagaggtggaatatgacggcaaaaacatggaagca ataatcgtgctacttgacttcctgtatcatcgtcttgatagggtgctacccccattaaaagatgatgtaaaaagactacc agaggaaggggatactctgagaaataggctatgtaagctgttgacatcaccaataacagaagtgaaggaacttactgcag atcttatttttgtgctttgtaaagagagtgtcaataggatggtcaaatacacagggtatggtaatgcagcaggcctgcta gccaacagagggttattattgggtggtaaaccccagggtgattacagtagtgatagtgatgagtcagaaacagaagagta ttctaatctgaaggaaatgataaatccagttacaggtcgttgggagcaacataaagccagtcctatggagggaatgactg aggaacagaaggagtatgaagctatgaaacttgtccaggcaatggacaaactacacagagggggtataatacaaccgtct acaataggtcctgatggtaaaccaagaccagtcgaacacatgctagaactgacatctaatatggacaatatgaacatcac agaggaacaagagagtgactag |
|
Protein
| Protein ID | pfu_aug2.0_270.1_00525.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00525.t1 MSLTEGHLGTLRSGEEQEICNILHNFVEKNGQTFSFPEITSSLKQGIVEAIMKKLDKPASSQCYIACLQTLRLFSREKDK LASMTTETSLALVMKMAGLQHYAHEDGEVIQIQNDDPEVMIEAQKCLCNLIYNSKQAQAVCSKNGCVEGIIQRLKTYKDP ELKYDIKFFDMRMLFLLTALCSDTRPRICYDLHGFTYLMEVVDLTLRDSESRQTSLTDQEVDLCSEILKILFNLTSSMDK NNLDEEEEAHFMRLVCVLRDLLMCNTLSKDKKEDLQSHTVNLLTNIPKDCYEELLIPLNEADINCIENKEVEYDGKNMEA IIVLLDFLYHRLDRVLPPLKDDVKRLPEEGDTLRNRLCKLLTSPITEVKELTADLIFVLCKESVNRMVKYTGYGNAAGLL ANRGLLLGGKPQGDYSSDSDESETEEYSNLKEMINPVTGRWEQHKASPMEGMTEEQKEYEAMKLVQAMDKLHRGGIIQPS TIGPDGKPRPVEHMLELTSNMDNMNITEEQESD |
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