Gene
| Gene Model ID | pfu_aug2.0_270.1_00528 |
|---|---|
| Locus | scaffold270.1 : 203070 ... 204596 : + |
| To GenomeBrowser | scaffold270.1:203070..204596 |
| Genes list of scaffold | scaffold270.1 |
| Synonym | pfu_aug1.0_5.1_65175 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_270.1_00528.t1 | 1 | 1 | DUF4562 | 42 | 109 | 1.0e-15 | 57.5 | 1.1e-19 | 1.6e-15 | 56.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_270.1_00528.t1 | gi|524876361|ref|XP_005094898.1| | PREDICTED: uncharacterized protein LOC101855712 [Aplysia californica] | 3.0e-39 |
| pfu_aug2.0_270.1_00528.t1 | gi|260830880|ref|XP_002610388.1| | hypothetical protein BRAFLDRAFT_120041 [Branchiostoma floridae] | 3.0e-11 |
| pfu_aug2.0_270.1_00528.t1 | gi|209738182|gb|ACI69960.1| | FLJ25371 [Salmo salar] | 3.0e-10 |
| pfu_aug2.0_270.1_00528.t1 | gi|213512158|ref|NP_001134722.1| | YD008 protein [Salmo salar] | 3.0e-10 |
| pfu_aug2.0_270.1_00528.t1 | gi|291235223|ref|XP_002737545.1| | PREDICTED: uncharacterized protein C4orf45 homolog [Saccoglossus kowalevskii] | 4.0e-10 |
Transcript
| Transcript ID | pfu_aug2.0_270.1_00528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00528.t1 atggcggagagacagacgcacagtgccacatctcaccacactcacagctcctcagagacggaggccaccagagtatcggc cacgccggcccaccaacaatgggcggcatacagtggaccagtactattcacaggtcctgacggtttaagcgactacaaag ccaaaccttgtcctgattttcagatgactggaatcggggaacgctcacgtgaagtcactagtcagatggactatctcagt cggccaccgcctggagccaaattcccattggccaaaaatggccgaataggtgaaatagggtggccagttgaagccttcaa aatcgtaaaaggaatatga |
|
Protein
| Protein ID | pfu_aug2.0_270.1_00528.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00528.t1 MAERQTHSATSHHTHSSSETEATRVSATPAHQQWAAYSGPVLFTGPDGLSDYKAKPCPDFQMTGIGERSREVTSQMDYLS RPPPGAKFPLAKNGRIGEIGWPVEAFKIVKGI |
|