Gene
| Gene Model ID | pfu_aug2.0_270.1_00530 |
|---|---|
| Locus | scaffold270.1 : 270170 ... 290684 : + |
| To GenomeBrowser | scaffold270.1:270170..290684 |
| Genes list of scaffold | scaffold270.1 |
| Synonym | pfu_aug1.0_542.1_50935 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ets-related transcription factor elf-3 | GO:0003700 GO:0005634 GO:0006355 GO:0032502 GO:0043565 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_270.1_00530.t1 | 1 | 1 | SAM_PNT | 206 | 277 | 9.2e-12 | 44.5 | 3.0e-15 | 2.2e-11 | 43.3 |
| pfu_aug2.0_270.1_00530.t1 | 2 | 1 | Ets | 331 | 345 | 6.4e-28 | 96.7 | 1.9 | 14000.0 | -3.8 |
| pfu_aug2.0_270.1_00530.t1 | 2 | 2 | Ets | 453 | 534 | 6.4e-28 | 96.7 | 8.6e-32 | 6.4e-28 | 96.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_270.1_00530.t1 | gi|676433417|ref|XP_009046893.1| | hypothetical protein LOTGIDRAFT_138494, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_270.1_00530.t1 | gi|524880592|ref|XP_005096958.1| | PREDICTED: uncharacterized protein DDB_G0283357-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_270.1_00530.t1 | gi|505829824|ref|XP_004610211.1| | 6.0e-39 | |
| pfu_aug2.0_270.1_00530.t1 | gi|545503955|ref|XP_005622248.1| | PREDICTED: ETS-related transcription factor Elf-3 isoform X1 [Canis lupus familiaris] | 2.0e-37 |
| pfu_aug2.0_270.1_00530.t1 | gi|348577931|ref|XP_003474737.1| | PREDICTED: ETS-related transcription factor Elf-3 [Cavia porcellus] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_270.1_00530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00530.t1 atgaacgttgaaatgaaatgcatcgttacgtattatccgttacacctgtgcataagttgcggacctcagtggtcaaagtt taagagccactccaaagcaggaagtgacgtaccactgcgagcagaacacgtgacagcgacaagtagtatgccaactgtga gctcgtcacaatatatcaccagtatgatagaggatatggaaccgccgtcatacattttggataattcctacgtgcacaat actcaaaataataactttgacattgccgatttcttatgcgactccggggtccatccaaacgaatcacgtgatcagtgcaa tttgtccgaagattcttgcaacagaagcgactgtacagacggttactatggttaccagtccagtggggactacatagatc cccccagtgaatattgtaatgacaatgtgccttatgacacggactctctcaaatattcatgtaacccttctgacagatcc gggtgcactgtggatgacgatggcaaagttaaagcaatatctgtaagacaagatcacagtgcccaaatttcccaaagacc catgaacgattcatgcggaaagggcgtaaaaatggaagaaagtcccgaatttttaaggtggacgagtaggcacccggaga actggtccccgcaggaagtgctagattggttgttttttgcagcagaaaaacacaatttagactgcacccacctacacgcc gagaacttccggtcagttgccggggccgatctctgcaaaatgacgttagatgactttttgctgcatgaaccaaactacgg caaattgttttacgacatgttcagaaatctgtgtgacggattgcatttttcacaaccaaatgacagtcattctcaagatt gtctggagtatgatgacgtcaccagaaattcgccgttacgacccaccctccataatatgaactcagatccaggtcctatg aaccagtcatatataccagatctctccagcaaacctgaaatgaaaatggaacatatgtcagaacacgtgatgaacgatca catgatgtacgatatccaacaactgaccaaatataactaccaaatgccaatgtcacatctcttacaagctcagtcaatga agcaccacccattccacacccatccccaccctcaccacatgtctccatatgaacaatacccaccacattgcatgtactcg gacttcggagcaatgcaccgcatgccaccaccgccatgtcatatcccagaagaccacatggtgcctcagccaattagaag gcgacctggaagaccccggattaaaagtctaccattagaagaggaagctgccagagataagaaagcaaaaaaccaacatt tatgggagttcatatacgaaattctgatgaatccattgtacaatccacaatatctacgttgggagaatcaacgcgaggga gtgttccgttttgtccaatcagaagccgtggcacagttatggggtggccttaaaaacaacgaaaacatgacgtacgaaaa attgagtcgcgcaatgaggcactattacaagagaggtattttagaacgagtagagggacgacgacttgtctacaaatttt ctcgaattgcaatggaaagagtccgagagaaacggtactcagtctaa |
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Protein
| Protein ID | pfu_aug2.0_270.1_00530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00530.t1 MNVEMKCIVTYYPLHLCISCGPQWSKFKSHSKAGSDVPLRAEHVTATSSMPTVSSSQYITSMIEDMEPPSYILDNSYVHN TQNNNFDIADFLCDSGVHPNESRDQCNLSEDSCNRSDCTDGYYGYQSSGDYIDPPSEYCNDNVPYDTDSLKYSCNPSDRS GCTVDDDGKVKAISVRQDHSAQISQRPMNDSCGKGVKMEESPEFLRWTSRHPENWSPQEVLDWLFFAAEKHNLDCTHLHA ENFRSVAGADLCKMTLDDFLLHEPNYGKLFYDMFRNLCDGLHFSQPNDSHSQDCLEYDDVTRNSPLRPTLHNMNSDPGPM NQSYIPDLSSKPEMKMEHMSEHVMNDHMMYDIQQLTKYNYQMPMSHLLQAQSMKHHPFHTHPHPHHMSPYEQYPPHCMYS DFGAMHRMPPPPCHIPEDHMVPQPIRRRPGRPRIKSLPLEEEAARDKKAKNQHLWEFIYEILMNPLYNPQYLRWENQREG VFRFVQSEAVAQLWGGLKNNENMTYEKLSRAMRHYYKRGILERVEGRRLVYKFSRIAMERVREKRYSV |
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