Gene
| Gene Model ID | pfu_aug2.0_270.1_00532 |
|---|---|
| Locus | scaffold270.1 : 353468 ... 378501 : - |
| To GenomeBrowser | scaffold270.1:353468..378501 |
| Genes list of scaffold | scaffold270.1 |
| Synonym | pfu_aug1.0_12229.1_53798 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_270.1_00532.t1 | 2 | 1 | DDE_Tnp_IS1595 | 138 | 228 | 8.6e-11 | 41.8 | 3.4e-14 | 5.0e-10 | 39.4 |
| pfu_aug2.0_270.1_00532.t1 | 2 | 2 | DDE_Tnp_IS1595 | 298 | 328 | 8.6e-11 | 41.8 | 0.084 | 1200.0 | -0.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_270.1_00532.t1 | gi|695384637|ref|XP_009518060.1| | hypothetical protein PHYSODRAFT_248304 [Phytophthora sojae] | 4.0e-22 |
| pfu_aug2.0_270.1_00532.t1 | gi|759035078|ref|XP_011337302.1| | PREDICTED: uncharacterized protein LOC105279325 [Cerapachys biroi] | 2.0e-19 |
| pfu_aug2.0_270.1_00532.t1 | gi|524883788|ref|XP_005098520.1| | PREDICTED: uncharacterized protein LOC101846883 [Aplysia californica] | 3.0e-19 |
| pfu_aug2.0_270.1_00532.t1 | gi|641670053|ref|XP_008185042.1| | PREDICTED: uncharacterized protein LOC103309975 [Acyrthosiphon pisum] | 1.0e-18 |
| pfu_aug2.0_270.1_00532.t1 | gi|759058445|ref|XP_011338455.1| | PREDICTED: uncharacterized protein LOC105279999 [Cerapachys biroi] | 1.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_270.1_00532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00532.t1 atggacgtttttacattcttttcttcggtcgctaacaatgccgacgccattcgatttccccgcggtaaaggacttctgaa gcggggggaagtactaatatccttgcagaatttttggtgcagtcagatccgtatgcagaccaagacggatggtaacatgt ttctgtttcgatgcagccactgtcgcaagaaatattctctccgtgaggattccttctttgctggcaaccatctagcgcta cgaatatgtataaccattatgtatttcttcgcgctagagatcctgctcggaacaatgcagaccgtgcttcctggccagct ttctcgtactgcgatggtcgactggctcaatttctgtcgagagatttgcagtgctgctctaatcagaagatctattatcc tgggaggtcaaggtgagattgttgagatagatgagtccaaatggggtagttttcgtaagtatagtcgtggatcagtcagg aatgaagggggaccatggattttcggaatgatcgaacgaaaagggcgttttgtcgtttggagcgttcaggaccgaaccaa ggccacccttcagcctttgattctatgcaacacggtaccaggacccaccatctactcggacgaatgggccctgtgcgcca atctgacttccattggatacactcataggacggagaccgcagtagaggaagccgatttagaggaagctgagtggagtgtg acgttaaacgaggaactcgtcgatacgtcaaaatctgacccgcctgtaataccgattgctagaaattgtttaggagaccc tgaccggaagttagaaggaccaacttccggaagcgcggctaaagatgttatcgactcaaatcgcaactcacaagttcata gtgagggagcaaacatcaactcacgcactttggaccacagcccgagcgatagagtgtcacagacaagcgtacacagtgtc gaaagcgtatttcaacagatagctgcaactctacaagaaagtttcaatcttccaaaaccagaactcttgacattcagtgg tagtcccatagattactgcaaaacgcacgcacttcttgatgacggacttgacaagtctatgtgtgacgaaagaccgctaa aaattctgaacatcaaaagccgatccgacgcttttaagggatatggtcattatccatatttgtcactggtacttatccca tcatccggtaaaaatgaaaataaatccggggaaattcgcgttgtatttgactatgccgcaaaggcaacatcaccaccaag ttgtgcaacatatgcaatgaaaagaaccatacaggataacgctgattcgttaagaccggaagctgttaggactgtagaga ggaattttcatatggatgactgtctcaaatccgacgacaagacgcagtatactgtcgattgcatacaaaatcaggataaa acaggaaccgaagcaaacaaacaaaaacctccaccatatgaaaagaagcgaactcccgatatgggactgagaccaggtgc ccaggaagaagacaaaagattgaatgaattcagcttcgtacgagtaacggaaaatgtcggcaaggagtggggcataattg gtccccatcgtaattccgacaatttgctggaagacctttcctccaaacaccacgaaaatgttgtcgatcagaaagtttaa |
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Protein
| Protein ID | pfu_aug2.0_270.1_00532.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_270.1_00532.t1 MDVFTFFSSVANNADAIRFPRGKGLLKRGEVLISLQNFWCSQIRMQTKTDGNMFLFRCSHCRKKYSLREDSFFAGNHLAL RICITIMYFFALEILLGTMQTVLPGQLSRTAMVDWLNFCREICSAALIRRSIILGGQGEIVEIDESKWGSFRKYSRGSVR NEGGPWIFGMIERKGRFVVWSVQDRTKATLQPLILCNTVPGPTIYSDEWALCANLTSIGYTHRTETAVEEADLEEAEWSV TLNEELVDTSKSDPPVIPIARNCLGDPDRKLEGPTSGSAAKDVIDSNRNSQVHSEGANINSRTLDHSPSDRVSQTSVHSV ESVFQQIAATLQESFNLPKPELLTFSGSPIDYCKTHALLDDGLDKSMCDERPLKILNIKSRSDAFKGYGHYPYLSLVLIP SSGKNENKSGEIRVVFDYAAKATSPPSCATYAMKRTIQDNADSLRPEAVRTVERNFHMDDCLKSDDKTQYTVDCIQNQDK TGTEANKQKPPPYEKKRTPDMGLRPGAQEEDKRLNEFSFVRVTENVGKEWGIIGPHRNSDNLLEDLSSKHHENVVDQKV |
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