Gene
| Gene Model ID | pfu_aug2.0_2718.1_28914 |
|---|---|
| Locus | scaffold2718.1 : 2336 ... 6362 : + |
| To GenomeBrowser | scaffold2718.1:2336..6362 |
| Genes list of scaffold | scaffold2718.1 |
| Synonym | pfu_aug1.0_38179.1_34051 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2718.1_28914.t1 | 1 | 1 | RVT_1 | 783 | 924 | 9.0e-17 | 61.1 | 5.9e-20 | 1.7e-16 | 60.1 |
Transcript
| Transcript ID | pfu_aug2.0_2718.1_28914.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2718.1_28914.t1 atgttaaaaccagttcgtaacgggcaagaacggaagaataatgttcctactggtcgttttagtccgaatagatttaaatt ccaaaacaggtcccatgatgaatttgtcgatttctcaaatgaacaacatgttcatattcctggaaattctaggagtgatc cacaagtatatagatactttcaagaacctcacaattcattcagagaggcagatgcacattcgttatccggtagttccgtt tcttacgtcactttggataggtataacgaaactgaagatacaaattttgcacgtaatttccattcaaactacaatcgtgg tttcagaacagaggattctgcttcgcacacgcgtcttcaagagtcacaaaatgtacacacggatacaaatagacctctgt ttatcaacagaaacatacaaaataactgcgactcaaacttttccctcgctgtaaactctcattcaaacggaaatcgaatg tcccgtgatagcggttcagtttacgtagaaaatatgtatccggaacaaaacggaattccacttaacaccgccgagagata tagaatgaatgaagggagaccaaatatacatacaggagtatatccataccgcaatgacgaattttcggagcatcaaggaa aacattattttcctagtttagccgaacgacaacaaataccgactcctgaattccaaccggtttctaatggaaataatgct cgcataccgaacaattttgctccacatagtagatatgtagatcaaatacacgaaagacccgcgagaaacgatagaattcg tcatatgaccgaaacgcgcccagttaacagaaaacttaaaaatcctgacacatatgacggtcaaaatgttgagtggaaag attacatttgtcattttgagcaagtttcacaatggaacatgtggagtgaaaatgatatggctgctcaattagccatgagt ttgcgcggaaatgcacagaggcttcttagcgagttgaccgctgtcgaactttcgaattattttcaattaaaacaggcgct aacaaagaggttttgtccacctgaacgcgagatcgcctacaggtgcgagtttcgaaatagaaagagaaaggaaaaggagt ctgtagcggactttggatacgcactacggcgactatcatcacttgcgtttccgagtttacctacgtatgcccgagagagc atgcttatagagcaatacatttccggattaggtaatcaggaattgagacgacatgtgcagtttgcacatccgcaatcgtt cgataaggcaatatcccttgccttagaatttgaagcttttgaaggagttcaattcggttcaaggaaaccgatcaacggtg acgcgttacaagaacgggctgagtcaggggccaagtgctcggcccatgaggaagtagataatgaagagatttcattacgg ccacctagttcgactgggttgacctctgtggatacaactttgatgacggcggatggggaaaccatgaaagtctatggaga gactttattgtcattgaaagttggcgaccagatatttgcacactctgtgatggtggcagagttaggagaatttccaggtg gtatacttggacttgattttcttgctgaacaaagaatattgatagacactagtgcgggaattatgaaatcatcgctgttt gaattacagctccataaagaaaaacctgtcaataaatgcgccaaagttcatcttaacactccgattacaataccctcaaa gaccgaaatttatacaaaatgcaaaattgtaggacattttccgaaccaaacagaaggcattattgagccttttaaggatt ttcaaggagaacatcaagttctcgttccgaaatcagtagtttgtccatctgatgcgggagttataatttcaattttaaat ccaacgcaatatcctgtccagttacacgagaacttagagatagccaccattcaacaggttgaatgcgtggtaaattccgt atcaaaagagaagtactttcccgagaagcagacttccgctttaccagaacatttagcaccactgtttgagaattcttcga agaagctcaatgaggacgagaagaatgaacttaaggagacaatattacaatattcggacatttttgttggtccgaacaat gcccttggacaaacggacattgtaaagcataggattgacgttggcgatgctaagctaataaaattgccgcctcgcagatt accaattcatcaaagggaagatgcagaacaagaaataaacagcatgttggagaatggaataattgagaacagcaatagcc cgtgggcttcacccattgtactggcaaaaaagaaggacggaacaacgcgtttttgcgttgattatcgtaaattaaattca gttaccatcaaagatgcctatccgttaccgaaaatagatgaatcaataagttcactctcaggcgccaaatacttttgtac tttggacctagcaagtggattctggcaagttgccatggatgaggaagacaaaaagtacaccgctttcacgacacacaagg ggctcttccaattcaaagtgatgccatttgggctatccaatagcccagccacattcgaacgcctcatggaaattgcttta aatggactccaatgggaaagatgtctcgtctatctagacgacgtaattgtattcgggaaaaatttcaaggagaccatctt caacctaaagctagtctttgaaagattcaaatcagcaaatttnggcttcaagatctatccccctacataa |
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Protein
| Protein ID | pfu_aug2.0_2718.1_28914.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2718.1_28914.t1 MLKPVRNGQERKNNVPTGRFSPNRFKFQNRSHDEFVDFSNEQHVHIPGNSRSDPQVYRYFQEPHNSFREADAHSLSGSSV SYVTLDRYNETEDTNFARNFHSNYNRGFRTEDSASHTRLQESQNVHTDTNRPLFINRNIQNNCDSNFSLAVNSHSNGNRM SRDSGSVYVENMYPEQNGIPLNTAERYRMNEGRPNIHTGVYPYRNDEFSEHQGKHYFPSLAERQQIPTPEFQPVSNGNNA RIPNNFAPHSRYVDQIHERPARNDRIRHMTETRPVNRKLKNPDTYDGQNVEWKDYICHFEQVSQWNMWSENDMAAQLAMS LRGNAQRLLSELTAVELSNYFQLKQALTKRFCPPEREIAYRCEFRNRKRKEKESVADFGYALRRLSSLAFPSLPTYARES MLIEQYISGLGNQELRRHVQFAHPQSFDKAISLALEFEAFEGVQFGSRKPINGDALQERAESGAKCSAHEEVDNEEISLR PPSSTGLTSVDTTLMTADGETMKVYGETLLSLKVGDQIFAHSVMVAELGEFPGGILGLDFLAEQRILIDTSAGIMKSSLF ELQLHKEKPVNKCAKVHLNTPITIPSKTEIYTKCKIVGHFPNQTEGIIEPFKDFQGEHQVLVPKSVVCPSDAGVIISILN PTQYPVQLHENLEIATIQQVECVVNSVSKEKYFPEKQTSALPEHLAPLFENSSKKLNEDEKNELKETILQYSDIFVGPNN ALGQTDIVKHRIDVGDAKLIKLPPRRLPIHQREDAEQEINSMLENGIIENSNSPWASPIVLAKKKDGTTRFCVDYRKLNS VTIKDAYPLPKIDESISSLSGAKYFCTLDLASGFWQVAMDEEDKKYTAFTTHKGLFQFKVMPFGLSNSPATFERLMEIAL NGLQWERCLVYLDDVIVFGKNFKETIFNLKLVFERFKSANXGFKIYPPT |
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