Gene
| Gene Model ID | pfu_aug2.0_2725.1_18902 |
|---|---|
| Locus | scaffold2725.1 : 9018 ... 13275 : - |
| To GenomeBrowser | scaffold2725.1:9018..13275 |
| Genes list of scaffold | scaffold2725.1 |
| Synonym | pfu_aug1.0_8683.1_31629 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2725.1_18902.t1 | 1 | 1 | NACHT | 73 | 216 | 1.8e-11 | 43.9 | 1.5e-14 | 5.4e-11 | 42.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2725.1_18902.t1 | gi|542252499|ref|XP_005462212.1| | PREDICTED: protein NLRC3-like [Oreochromis niloticus] | 4.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_2725.1_18902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2725.1_18902.t1 atgagacattcgattcttcattggaatgagatagtagccgagcgaattcaaatccttcctttggacccagatgatacgac gaaaattgatgatatatacactcaagtcgtaataagtgatgaaagcgaaacgactaagtataatcaatatgacacagaag acataaaaaatatcgaactccacgaaatatttcacgtgctacatgatcaaccagcacgtttcgttttcatgttaggggaa gccgggtatggcaagacagttctttgtcaaaaaattacaagatcgtggtgtcaagcatggagaaatgaaaattgtcagga tgatttactaggaacactgaaaatttttgattttctctttttcgtaaaattgcatgataatcaaaacaataacacgtccc ttatagatataatacttgaagcatacagccgataccatccatcacaagaatgtttgaacaacattcaaaacattctagag caaggtacatgtaagagtcttgttattctcgacggcctcgatgaatggaatatacctgaagtggaaaaaaaatcgcttat ggataacgggataccaggctgtagaaatatgccaaattgcacaattttgataagcatgaggtcatggaagttcttggaag taaaacaattaagactttatcagatggacagagttgtccgtttatgtggtctcgatgaaagagggttcaagtactttaca gaaaagatactttgcagctatctaaagttggataaaacttctgacgaatttcatgctattaccagtaggattgaaggttt catatcaacttcatcatatgcggcgtcatctttgatgaaaattcctcttctagccgttttctgtatccttacattccatc acaatgttcaaagtggaaattcactgacctctcttttcctttcaattattgaggccttggtaagaagatcaaagctgtat ggtggacttgatataaggagtgctgaatttgaacccatagaccctacattagaaaactataggcatgtgcagaattatag aaacgatctatctcaccttggaaaaatagcattttctggactgacatcagaaaacaaagctcttatcttcagaagcaggg actgcaatgaaacatttggcgaaagagtattagaaagatatcttaaaattggacttttaattaaaacgaatacatctgga cagttgtattcaagaaacttcaaattcagttttctccataagacaatacaagaattcctcgcggcgttttacctctggac agagggcaacattgatgattatttcttacgcaaacacgtgcttgatgttgagaaagcattggaattttcaatggttttaa catttttatctggactttcatcgttagatggatgcaagatatcaaggcaccttaaggatttggcttcgacagatgaagat attcaaagttttcgattacattttgcatctgatagctatgagaaagtttttcatctttatgatttacagctaagatgcta cagggaaatcagacacccgaagaataaagaatgtttcagtgaggatgatgaattgaaattttcattttctgacataatct tacatggaaaagattcagaccgccagctcatcagagacaccgccgacgttttactcaagcatccacatgacatagaatcg cttcaaatgaaattcattcccgatgacgagcagaatggcataacaaacgatgaacttaacaactttttggataaaagtac gtcaatcaagtcagtgaatattgatgggtacgttgatggacagtgcagagtattcacacatttcagcgagaaaatgaaac aactgactactctaggattacacaacattgcaatcgaaggcgagatcttgacagatctatttacaaaaaatactgcaagc aactttaaggcacttgctctacactacataagaagttctgacgatccaaatgtcggatttgagtataattttccatcaga aaaatcaaaacccagtagacgttctggctatgagcgaaaagaaagaatgcgtgcattacgtacacccgattcccacaata acgaggatagtggaaaaccacttttgaaggaaatactgagggtccttccggattttgagcttttaacaacattacatgta tcgtacatggagtctttggaggatagaaacatactcctaggtgtggcgaaaaagctacaaactaaaggaaaattaaagaa ctttggataccagggtagcacaatgtacaatgttgttgatgatcaatatgacaccgaaatcattgaagtgatatttacaa tgaatcaacttcaatacatttttctttgtgacatagctttgatcaatgaatttccagtttttcctgaaatgttgcaacta aagaagttcgcccttcaagacattagcctgaacaaaatggaatggagaaaacttgttacaacactgtcagatctttcgaa caaagcatgccttgagaacgtagttttaacagacacagatatcgacgatgaaagcttgaaacagtttgaagttgcaccag gtttattggtaaaaaatgatacctacatgatttga |
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Protein
| Protein ID | pfu_aug2.0_2725.1_18902.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2725.1_18902.t1 MRHSILHWNEIVAERIQILPLDPDDTTKIDDIYTQVVISDESETTKYNQYDTEDIKNIELHEIFHVLHDQPARFVFMLGE AGYGKTVLCQKITRSWCQAWRNENCQDDLLGTLKIFDFLFFVKLHDNQNNNTSLIDIILEAYSRYHPSQECLNNIQNILE QGTCKSLVILDGLDEWNIPEVEKKSLMDNGIPGCRNMPNCTILISMRSWKFLEVKQLRLYQMDRVVRLCGLDERGFKYFT EKILCSYLKLDKTSDEFHAITSRIEGFISTSSYAASSLMKIPLLAVFCILTFHHNVQSGNSLTSLFLSIIEALVRRSKLY GGLDIRSAEFEPIDPTLENYRHVQNYRNDLSHLGKIAFSGLTSENKALIFRSRDCNETFGERVLERYLKIGLLIKTNTSG QLYSRNFKFSFLHKTIQEFLAAFYLWTEGNIDDYFLRKHVLDVEKALEFSMVLTFLSGLSSLDGCKISRHLKDLASTDED IQSFRLHFASDSYEKVFHLYDLQLRCYREIRHPKNKECFSEDDELKFSFSDIILHGKDSDRQLIRDTADVLLKHPHDIES LQMKFIPDDEQNGITNDELNNFLDKSTSIKSVNIDGYVDGQCRVFTHFSEKMKQLTTLGLHNIAIEGEILTDLFTKNTAS NFKALALHYIRSSDDPNVGFEYNFPSEKSKPSRRSGYERKERMRALRTPDSHNNEDSGKPLLKEILRVLPDFELLTTLHV SYMESLEDRNILLGVAKKLQTKGKLKNFGYQGSTMYNVVDDQYDTEIIEVIFTMNQLQYIFLCDIALINEFPVFPEMLQL KKFALQDISLNKMEWRKLVTTLSDLSNKACLENVVLTDTDIDDESLKQFEVAPGLLVKNDTYMI |
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