Gene
| Gene Model ID | pfu_aug2.0_2729.1_32284 |
|---|---|
| Locus | scaffold2729.1 : 33634 ... 50395 : - |
| To GenomeBrowser | scaffold2729.1:33634..50395 |
| Genes list of scaffold | scaffold2729.1 |
| Synonym | pfu_aug1.0_141201.1_71833 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2729.1_32284.t1 | 1 | 1 | DNA_pol_A_exo1 | 166 | 243 | 2.5e-08 | 33.6 | 9.0e-12 | 4.5e-08 | 32.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2729.1_32284.t1 | gi|676424922|ref|XP_009044279.1| | hypothetical protein LOTGIDRAFT_65115, partial [Lottia gigantea] | 5.99994e-41 |
| pfu_aug2.0_2729.1_32284.t1 | gi|585665603|ref|XP_006816963.1| | PREDICTED: uncharacterized protein LOC102808302 [Saccoglossus kowalevskii] | 1.0e-39 |
| pfu_aug2.0_2729.1_32284.t1 | gi|524872803|ref|XP_005093158.1| | PREDICTED: uncharacterized protein LOC101862633 [Aplysia californica] | 5.0e-39 |
| pfu_aug2.0_2729.1_32284.t1 | gi|632983852|ref|XP_007908852.1| | PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X1 [Callorhinchus milii] | 1.0e-30 |
| pfu_aug2.0_2729.1_32284.t1 | gi|632983854|ref|XP_007908853.1| | PREDICTED: exonuclease 3'-5' domain-containing protein 1 isoform X2 [Callorhinchus milii] | 2.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_2729.1_32284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2729.1_32284.t1 atggcggagcttgcagagtttgtgggaaaacgtgttgttttagaactgaaggaaggggccaccctcaatggttttgttca tgcattagatgcaacaacatcaaaattaactctacataaagtgatttttaaaatcacttcatacagtagttcccctgact gtttagagtcaacattgtttacaagcgagaaggggataaagttactcaaagacaagcacattcctaagcatcttcagagg ttacgtgatttccagcagtccaacatagaattaaggcaactaaatatatcggatgaagaggcaaatatttctgaaaaacc agctaaccagacctcagagtacgattctagcagtgacccagaacaactggatgatgtagatgctccatatgtactaatta acaaactggatcagagatttagagatgcggtacactacataagtcaacagcagattatagggtttgccatccaggccgtg tgtccagggagattgggaaagctatgttggttacagtttggtacggcagagcatgttttcatctttgatgtgttgtctat gggacctctatcctttgaggaaggaattaaaaaaatcttagagagtcctgacattcagaaggttatgcatgactgccgtt tggtgtcggacatgctccaccatcagtatgatacaaatcttatcaacatttttgatacagaggaggatcaagaagtgtgg gccaagcgtccagcatcccgagacattttaatggctgccatgaaaaacgttatgcacctcaggaaactacgctacgtatt ggaagagaaaatgatggcggaattcgtggcaggagttgacatatatcttagtcaagttaaaaatgcctcaaaacaggatg ccaagaaagcacagatctcaaatcacaagttgcctctagcatttcaagaattgccttcaatgatgtcacatcgagaccac agacggttttatcggagaagtaacggtgtgggtgacaatttcagcaagtctgatattaaaggattcagggacaatgtagc agttataaatgatgttaatgttagttacagtcgagattctccatggcatgtagtgccagaagggaagaaaaattttgaga aagtgctttctcagaaagcagcagaagtagacaattcatcttcaccagtcaaacaacattctagtgtgaattgtgctccc actgatatgtcttctgcttctgaggtcagaagtaactctctgtcaagagaacactcttctaaagatatagatgaaagcag ttcttctaaacgtttcagtgattctgacacagtgaaagaagagttacttgacgaagaagtttccgggtcagttaaattcc acagcatgaaactaaaaccttttaaacctttaccggatctgaaaagtttaacttctatgaatgttgcagaaaagagtggt gaggtaaatttgaatgacaaaacaaataaattggatgtttcggattctgaagagaatggcactgcctctgtgggtaaact catcagagatgcccttaaacaaaataatgtgtccttacaaagttcagatctggatcagtttaaaatcatgccggctggaa gacttatcaattataatgccggcatcaatgacaagacaacgagaaaaagaatgagagaatttaagaccaaattattgtct gagagagatgctcaggattttcataccagacatatgttatctgattctgagatggaaatgcacgaatctcacgcaagaca tatgctacatgagagggaaatgcaggaatctcatgagagactaaaatgctcaaatgtgtctcagaataatgtgccggagc atcaaatgtccacacgttctttatttcacaaaaaagtaacatcccctccgtcgattgatcatcaccctgctggtatgaat tgttcatctccagttttcactagaagtattggaggagggatgcaggaaacttctccatctaactgtggaagcaaacgatc tgctcagtctatcaatgggctgagagctttacaaagatttttgaagtcgggaaagagtgcagatagtgaagaaatgaata cgtcttcttcaccagagtcaaaacttcaccagagtgttaatacacgtatgtacaataatggagacttaaagggaggattt ttacctcagtctccaaacagtctttcagggtccacaagtagttcatcattatcatctccacagtacatgggtagaggggc aaccccaccctcaggggggcataatgtgtctgattgcccctcccannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnncagagatattttttcatgacctttgatctggtgaagtacaatattttacaagacagaatggaaatgtgcca gactaaaattttaagtgaaatttattaa |
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Protein
| Protein ID | pfu_aug2.0_2729.1_32284.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2729.1_32284.t1 MAELAEFVGKRVVLELKEGATLNGFVHALDATTSKLTLHKVIFKITSYSSSPDCLESTLFTSEKGIKLLKDKHIPKHLQR LRDFQQSNIELRQLNISDEEANISEKPANQTSEYDSSSDPEQLDDVDAPYVLINKLDQRFRDAVHYISQQQIIGFAIQAV CPGRLGKLCWLQFGTAEHVFIFDVLSMGPLSFEEGIKKILESPDIQKVMHDCRLVSDMLHHQYDTNLINIFDTEEDQEVW AKRPASRDILMAAMKNVMHLRKLRYVLEEKMMAEFVAGVDIYLSQVKNASKQDAKKAQISNHKLPLAFQELPSMMSHRDH RRFYRRSNGVGDNFSKSDIKGFRDNVAVINDVNVSYSRDSPWHVVPEGKKNFEKVLSQKAAEVDNSSSPVKQHSSVNCAP TDMSSASEVRSNSLSREHSSKDIDESSSSKRFSDSDTVKEELLDEEVSGSVKFHSMKLKPFKPLPDLKSLTSMNVAEKSG EVNLNDKTNKLDVSDSEENGTASVGKLIRDALKQNNVSLQSSDLDQFKIMPAGRLINYNAGINDKTTRKRMREFKTKLLS ERDAQDFHTRHMLSDSEMEMHESHARHMLHEREMQESHERLKCSNVSQNNVPEHQMSTRSLFHKKVTSPPSIDHHPAGMN CSSPVFTRSIGGGMQETSPSNCGSKRSAQSINGLRALQRFLKSGKSADSEEMNTSSSPESKLHQSVNTRMYNNGDLKGGF LPQSPNSLSGSTSSSSLSSPQYMGRGATPPSGGHNVSDCPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXQRYFFMTFDLVKYNILQDRMEMCQTKILSEIY |
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