Gene
| Gene Model ID | pfu_aug2.0_2734.1_15609 |
|---|---|
| Locus | scaffold2734.1 : 40397 ... 42215 : - |
| To GenomeBrowser | scaffold2734.1:40397..42215 |
| Genes list of scaffold | scaffold2734.1 |
| Synonym | pfu_aug1.0_12596.1_25051 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2734.1_15609.t1 | 2 | 1 | EF-hand_4 | 8 | 72 | 6.4e-06 | 25.8 | 8.6e-05 | 0.071 | 12.8 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 1 | EF-hand_1 | 9 | 17 | 1.2e-13 | 49.2 | 4.5 | 3700.0 | -2.4 |
| pfu_aug2.0_2734.1_15609.t1 | 2 | 1 | EF-hand_7 | 26 | 74 | 1.8e-18 | 66.4 | 1.2e-06 | 0.001 | 19.1 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 2 | EF-hand_1 | 26 | 38 | 1.2e-13 | 49.2 | 1.2 | 1000.0 | -0.6 |
| pfu_aug2.0_2734.1_15609.t1 | 5 | 1 | EF-hand_6 | 26 | 40 | 2.6e-13 | 48.6 | 0.066 | 54.0 | 4.0 |
| pfu_aug2.0_2734.1_15609.t1 | 3 | 1 | EF-hand_8 | 30 | 72 | 2.5e-17 | 62.2 | 0.00033 | 0.27 | 10.8 |
| pfu_aug2.0_2734.1_15609.t1 | 5 | 2 | EF-hand_6 | 44 | 54 | 2.6e-13 | 48.6 | 3.6 | 3000.0 | -1.4 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 3 | EF-hand_1 | 45 | 54 | 1.2e-13 | 49.2 | 4.4 | 3600.0 | -2.3 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 4 | EF-hand_1 | 61 | 75 | 1.2e-13 | 49.2 | 6.5e-06 | 0.0053 | 15.9 |
| pfu_aug2.0_2734.1_15609.t1 | 5 | 3 | EF-hand_6 | 61 | 75 | 2.6e-13 | 48.6 | 0.00047 | 0.39 | 10.7 |
| pfu_aug2.0_2734.1_15609.t1 | 4 | 1 | EF-hand_5 | 61 | 72 | 9.3e-08 | 31.0 | 2.5e-05 | 0.021 | 14.1 |
| pfu_aug2.0_2734.1_15609.t1 | 3 | 2 | EF-hand_8 | 62 | 105 | 2.5e-17 | 62.2 | 7.2e-08 | 5.9e-05 | 22.5 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 5 | EF-hand_1 | 88 | 115 | 1.2e-13 | 49.2 | 3.2e-08 | 2.6e-05 | 23.1 |
| pfu_aug2.0_2734.1_15609.t1 | 5 | 4 | EF-hand_6 | 89 | 115 | 2.6e-13 | 48.6 | 7.1e-08 | 5.8e-05 | 22.6 |
| pfu_aug2.0_2734.1_15609.t1 | 2 | 2 | EF-hand_7 | 91 | 147 | 1.8e-18 | 66.4 | 7.6e-16 | 6.3e-13 | 48.6 |
| pfu_aug2.0_2734.1_15609.t1 | 4 | 2 | EF-hand_5 | 91 | 104 | 9.3e-08 | 31.0 | 0.0016 | 1.3 | 8.4 |
| pfu_aug2.0_2734.1_15609.t1 | 2 | 2 | EF-hand_4 | 91 | 146 | 6.4e-06 | 25.8 | 0.00022 | 0.19 | 11.5 |
| pfu_aug2.0_2734.1_15609.t1 | 3 | 3 | EF-hand_8 | 108 | 151 | 2.5e-17 | 62.2 | 4.1e-13 | 3.4e-10 | 39.3 |
| pfu_aug2.0_2734.1_15609.t1 | 4 | 3 | EF-hand_5 | 119 | 127 | 9.3e-08 | 31.0 | 5.8 | 4800.0 | -2.8 |
| pfu_aug2.0_2734.1_15609.t1 | 6 | 6 | EF-hand_1 | 124 | 151 | 1.2e-13 | 49.2 | 3.8e-06 | 0.0031 | 16.6 |
| pfu_aug2.0_2734.1_15609.t1 | 5 | 5 | EF-hand_6 | 136 | 150 | 2.6e-13 | 48.6 | 0.0022 | 1.8 | 8.6 |
| pfu_aug2.0_2734.1_15609.t1 | 4 | 4 | EF-hand_5 | 137 | 148 | 9.3e-08 | 31.0 | 0.00018 | 0.15 | 11.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2734.1_15609.t1 | gi|156083146|ref|XP_001609057.1| | calmodulin [Babesia bovis T2Bo] | 9.00054e-42 |
| pfu_aug2.0_2734.1_15609.t1 | gi|543726522|ref|XP_005504377.1| | PREDICTED: calmodulin, striated muscle-like [Columba livia] | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug2.0_2734.1_15609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15609.t1 atgttatcagaagagcagaaagaagaatgtaaagagacatttgccctgtttataccggaaggcgaagagaaagagaaaat caaaatagaggaactagggaatgtgttacgtgcattgggacaggctcctacagaggcggaactaagcaagatgctcagtg acttaaattctgaaggcgatgattctgatgggaaaatcgattttgaagaattccttaacattgctgctcaaaagatgagg agagaagacgacagagaggatgaactagtaaatgcttttaaaatgttagacaaaaacggagagggttacataatgggtaa agagctacgtaatataatgacaactatcggcgaaaaactatctgaggaagaagtggaggagatgatcaaagaagctgaaa tgggagaagatggtagaattagttatgaagaatttgccagagtattaacaagtgaataa |
|
Protein
| Protein ID | pfu_aug2.0_2734.1_15609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15609.t1 MLSEEQKEECKETFALFIPEGEEKEKIKIEELGNVLRALGQAPTEAELSKMLSDLNSEGDDSDGKIDFEEFLNIAAQKMR REDDREDELVNAFKMLDKNGEGYIMGKELRNIMTTIGEKLSEEEVEEMIKEAEMGEDGRISYEEFARVLTSE |
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