Gene
| Gene Model ID | pfu_aug2.0_2734.1_15610 |
|---|---|
| Locus | scaffold2734.1 : 47314 ... 52085 : - |
| To GenomeBrowser | scaffold2734.1:47314..52085 |
| Genes list of scaffold | scaffold2734.1 |
| Synonym | pfu_aug1.0_30662.1_47988 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calmodulin | GO:0004871 GO:0005509 GO:0005513 GO:0005634 GO:0005829 GO:0005886 GO:0005982 GO:0009612 GO:0009909 GO:0019722 GO:0019899 GO:0030048 GO:0051645 GO:0051646 GO:0060151 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2734.1_15610.t1 | 2 | 1 | SPARC_Ca_bdg | 3 | 70 | 4.3e-09 | 36.3 | 9.8e-06 | 0.0097 | 15.9 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 1 | EF-hand_4 | 10 | 38 | 1.7e-07 | 30.9 | 0.044 | 43.0 | 3.9 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 1 | EF-hand_8 | 11 | 39 | 5.5e-22 | 77.1 | 2.5e-06 | 0.0024 | 17.4 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 1 | EF-hand_1 | 12 | 40 | 2.4e-31 | 104.6 | 1.3e-11 | 1.3e-08 | 33.5 |
| pfu_aug2.0_2734.1_15610.t1 | 5 | 1 | EF-hand_6 | 12 | 41 | 4.9e-25 | 85.1 | 2.9e-11 | 2.9e-08 | 32.9 |
| pfu_aug2.0_2734.1_15610.t1 | 2 | 1 | EF-hand_7 | 13 | 73 | 1.4e-31 | 108.4 | 1.1e-16 | 1.0e-13 | 51.1 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 1 | EF-hand_5 | 13 | 36 | 1.4e-19 | 68.4 | 5.7e-08 | 5.6e-05 | 22.2 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 1 | EF-hand_9 | 15 | 76 | 4.0e-12 | 45.8 | 6.4e-09 | 6.4e-06 | 25.9 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 2 | EF-hand_8 | 36 | 75 | 5.5e-22 | 77.1 | 6.5e-09 | 6.4e-06 | 25.6 |
| pfu_aug2.0_2734.1_15610.t1 | 5 | 2 | EF-hand_6 | 45 | 53 | 4.9e-25 | 85.1 | 7.2 | 7100.0 | -2.6 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 2 | EF-hand_4 | 47 | 75 | 1.7e-07 | 30.9 | 8.7e-05 | 0.086 | 12.5 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 2 | EF-hand_1 | 48 | 74 | 2.4e-31 | 104.6 | 2.7e-09 | 2.6e-06 | 26.3 |
| pfu_aug2.0_2734.1_15610.t1 | 5 | 3 | EF-hand_6 | 57 | 74 | 4.9e-25 | 85.1 | 5.4e-05 | 0.054 | 13.4 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 2 | EF-hand_5 | 57 | 69 | 1.4e-19 | 68.4 | 0.00012 | 0.12 | 11.7 |
| pfu_aug2.0_2734.1_15610.t1 | 2 | 2 | SPARC_Ca_bdg | 80 | 145 | 4.3e-09 | 36.3 | 1.0e-06 | 0.001 | 19.0 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 3 | EF-hand_1 | 86 | 114 | 2.4e-31 | 104.6 | 1.1e-09 | 1.1e-06 | 27.5 |
| pfu_aug2.0_2734.1_15610.t1 | 5 | 4 | EF-hand_6 | 86 | 115 | 4.9e-25 | 85.1 | 1.2e-09 | 1.2e-06 | 27.9 |
| pfu_aug2.0_2734.1_15610.t1 | 2 | 2 | EF-hand_7 | 87 | 147 | 1.4e-31 | 108.4 | 3.0e-19 | 2.9e-16 | 59.3 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 3 | EF-hand_8 | 89 | 103 | 5.5e-22 | 77.1 | 0.00012 | 0.12 | 12.0 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 3 | EF-hand_5 | 89 | 110 | 1.4e-19 | 68.4 | 1.3e-07 | 0.00013 | 21.1 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 2 | EF-hand_9 | 90 | 143 | 4.0e-12 | 45.8 | 2.5e-06 | 0.0025 | 17.6 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 3 | EF-hand_4 | 97 | 146 | 1.7e-07 | 30.9 | 5.4e-06 | 0.0053 | 16.4 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 4 | EF-hand_8 | 98 | 145 | 5.5e-22 | 77.1 | 8.1e-13 | 8.0e-10 | 38.1 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 4 | EF-hand_1 | 122 | 147 | 2.4e-31 | 104.6 | 7.7e-10 | 7.6e-07 | 27.9 |
| pfu_aug2.0_2734.1_15610.t1 | 4 | 4 | EF-hand_5 | 124 | 143 | 1.4e-19 | 68.4 | 7.8e-06 | 0.0077 | 15.5 |
| pfu_aug2.0_2734.1_15610.t1 | 5 | 5 | EF-hand_6 | 128 | 147 | 4.9e-25 | 85.1 | 1.8e-05 | 0.018 | 14.8 |
| pfu_aug2.0_2734.1_15610.t1 | 3 | 3 | EF-hand_9 | 145 | 154 | 4.0e-12 | 45.8 | 2.9 | 2900.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2734.1_15610.t1 | gi|413945839|gb|AFW78488.1| | calmodulin1 [Zea mays] | 0.0 |
| pfu_aug2.0_2734.1_15610.t1 | gi|293334895|ref|NP_001167666.1| | calmodulin [Zea mays] | 0.0 |
| pfu_aug2.0_2734.1_15610.t1 | gi|695036774|ref|XP_009405855.1| | PREDICTED: calmodulin [Musa acuminata subsp. malaccensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_2734.1_15610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15610.t1 atggaagagaagctaacagataagcagagagaagaaattaaagcggcctttgatttctttgacaaagatggaaatggagc gattgatgtgaatgaactcggtaatatgatgagaagtcttgggcagaatccgacggaggcagaacttaaggatatgatag caaatcaagatgtaaacagaaatggtactattgattacgatgaattcattatcatgatggaagaaaattacaaagacata agtaccgtagaagctgaacttttggcggcctttagagtgttcgatatggaccacaatgggtatatagaaagctcggagct cagaaaagtactcaaagatctcggagaacaattatcggagcaggaagtagaaaaaatcattcaagactacgatttggatg gagatggaaaaattaattatgttgagttcgtgaaagcaatagtagatccaaactgtggagagaaaacaggacagaagaat gcaattctttaa |
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Protein
| Protein ID | pfu_aug2.0_2734.1_15610.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2734.1_15610.t1 MEEKLTDKQREEIKAAFDFFDKDGNGAIDVNELGNMMRSLGQNPTEAELKDMIANQDVNRNGTIDYDEFIIMMEENYKDI STVEAELLAAFRVFDMDHNGYIESSELRKVLKDLGEQLSEQEVEKIIQDYDLDGDGKINYVEFVKAIVDPNCGEKTGQKN AIL |
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