Gene
| Gene Model ID | pfu_aug2.0_2736.1_22179 |
|---|---|
| Locus | scaffold2736.1 : 11667 ... 55525 : - |
| To GenomeBrowser | scaffold2736.1:11667..55525 |
| Genes list of scaffold | scaffold2736.1 |
| Synonym | pfu_aug1.0_40677.1_48416 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2736.1_22179.t1 | 3 | 1 | rve | 34 | 59 | 4.2e-21 | 75.2 | 0.47 | 3500.0 | -2.0 |
| pfu_aug2.0_2736.1_22179.t1 | 3 | 2 | rve | 218 | 233 | 4.2e-21 | 75.2 | 1.5 | 11000.0 | -3.6 |
| pfu_aug2.0_2736.1_22179.t1 | 3 | 3 | rve | 446 | 553 | 4.2e-21 | 75.2 | 2.6e-24 | 1.9e-20 | 73.1 |
Transcript
| Transcript ID | pfu_aug2.0_2736.1_22179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2736.1_22179.t1 atgcaaaaacacaaaagacgagtacagcacgagacggaaaagagacacacgtcatgtaaacatcaaacacaaaagactac acataaaccgacgagaccaatgggcaactggtgccgactttggacggccatgtgtcacgcgagtagcaaatggtgtggtt atcacgcaagtagcaaatggtgtggttatcacgcaagtagcaaatggtgtgaattaagctgttaccgatgttctcagatc aatgatccgtcagtttgtaatcataacgttacctgtccagatgcagatcacgcttgcatagtatcggagacagttggtga tgacttttcctaccatttcaatcttggttgtgtacgtaaacagtattgttcttctgacttgccacattcaatagtcgtgg gtaaaagaggagtccaaaagagaaatctcaagttcggttgctgtacaacaagcttatgtaacaacgtaatgcctcaacag atagcacctgtcatgcctaattcttgtcccgtcggaacttctgaatatcgagagagtagcattcacatttgttattacgc catattgtctatgcaaaatgcatcggagagtaacaaattatgtcagcagaagtacagtagcggacgactggcttacatac ccagtgcaaatgctgagtatttcatggagagagcactacagtcacaattcgggaacgaaagaggatctggagtatggatt ggagtctttgacaatatccaagaaggcaaattcgttgacacagatggtgaaccacaaaaatactttaactggcgctatga tcaaccgaatgatccaaatcgtaatgtggatggagatcctgcgcaggactgtgtcagcaaatcattactgaaagcaccga tgcgtctcaagggtatcttacttgccgtacagaaatatgatctggtagtaaagtacaaacctggaaaacttatgtttctc gcagatcatatcagcagattattcttaccggaaacaaccgaacagctgataccggatgtggaagtaaattccatatcacc tgcgtcatacttaccgttatcacaagatagatatcttgagctacaacagaaaacaggagaagacgaaacacttcaaactt tgaaaaacactgttcaaaatggttggccaatgaacaaaagtcagttaccttactatctacacccttactggaattgtgaa gtgcaaaagtcgccacgtgaagtattatattggccgggaatgtcatctcagattaagaacaaaatctcgcaatgttctgt ttgtgccgaaattcagaacagcaacccgaaggaaccgcttcttactgttgaaatacctaatcgtccatggactaaagtag ccacagatatcttcgttctcaactccaatcactacttacttaccgtagactattattcaaagtggccggaagttgtgaaa cttaatgagctcacctcgtcgtacgtcatagctgctttgaaaagtcaatttgcaaaatacggtatacccgatgaaatcat atctgacaacggtcctcagtactctagccgaggatttcaagaattcgctaattgctacggattcactcacaacacatcta gtccgcactacgcacagtcgaacggacaagcggagcgaatggtccaaaccgtgaaacgtcttctaaagaaatcatcagat ccatacctatctcttatggattaccgaaacacacctcttgagaacataggatattcacctgcgcaactatttctaggaag acgaatcaaaacaatgttaccgacaacatctgatctattgcgcacgcctaattcgaaactgattcaggagaaactccata accgccaagccaaagcaaagcatcactttgaccgcaaagcaggaaaaccgttatctcaactgaaagttggtgactctgtt atgattcagaatcatgcatctccaactacatggaaacacggcacagttgattcgaaacatcatgcggaaagatcttatat catccgaacaccagacaacaagtgttaccgcagaaatcgcaaaatgctgaaaccaactcaatctacaccgccattatctc atgatgtcacagttgagaaatctttcgcaaacccagactccgtatcttcaattccgaaagtcgcaaactcaacttcacaa ccgtcaacaaccaatggatccgcaaatttacaatcctccgttccgaacacactaaactcgaatctccagcaaactagaag tggccgcataattcattttcctgctagtaaggtagaagagctgaagaggagactagaagataaaggtttcacttgttacg atacagcagtgggagtgccggggattctttgtcactctatgacgtgtagaaatgagtctgctacatag |
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Protein
| Protein ID | pfu_aug2.0_2736.1_22179.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2736.1_22179.t1 MQKHKRRVQHETEKRHTSCKHQTQKTTHKPTRPMGNWCRLWTAMCHASSKWCGYHASSKWCGYHASSKWCELSCYRCSQI NDPSVCNHNVTCPDADHACIVSETVGDDFSYHFNLGCVRKQYCSSDLPHSIVVGKRGVQKRNLKFGCCTTSLCNNVMPQQ IAPVMPNSCPVGTSEYRESSIHICYYAILSMQNASESNKLCQQKYSSGRLAYIPSANAEYFMERALQSQFGNERGSGVWI GVFDNIQEGKFVDTDGEPQKYFNWRYDQPNDPNRNVDGDPAQDCVSKSLLKAPMRLKGILLAVQKYDLVVKYKPGKLMFL ADHISRLFLPETTEQLIPDVEVNSISPASYLPLSQDRYLELQQKTGEDETLQTLKNTVQNGWPMNKSQLPYYLHPYWNCE VQKSPREVLYWPGMSSQIKNKISQCSVCAEIQNSNPKEPLLTVEIPNRPWTKVATDIFVLNSNHYLLTVDYYSKWPEVVK LNELTSSYVIAALKSQFAKYGIPDEIISDNGPQYSSRGFQEFANCYGFTHNTSSPHYAQSNGQAERMVQTVKRLLKKSSD PYLSLMDYRNTPLENIGYSPAQLFLGRRIKTMLPTTSDLLRTPNSKLIQEKLHNRQAKAKHHFDRKAGKPLSQLKVGDSV MIQNHASPTTWKHGTVDSKHHAERSYIIRTPDNKCYRRNRKMLKPTQSTPPLSHDVTVEKSFANPDSVSSIPKVANSTSQ PSTTNGSANLQSSVPNTLNSNLQQTRSGRIIHFPASKVEELKRRLEDKGFTCYDTAVGVPGILCHSMTCRNESAT |
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