Gene
| Gene Model ID | pfu_aug2.0_2738.1_28925 |
|---|---|
| Locus | scaffold2738.1 : 45559 ... 48155 : - |
| To GenomeBrowser | scaffold2738.1:45559..48155 |
| Genes list of scaffold | scaffold2738.1 |
| Synonym | pfu_aug1.0_1931.1_08176 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2738.1_28925.t1 | 1 | 1 | 7tm_1 | 43 | 377 | 9.3e-32 | 110.1 | 1.9e-35 | 1.4e-31 | 109.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2738.1_28925.t1 | gi|260803651|ref|XP_002596703.1| | hypothetical protein BRAFLDRAFT_219110 [Branchiostoma floridae] | 2.0e-12 |
| pfu_aug2.0_2738.1_28925.t1 | gi|585180740|ref|XP_006742029.1| | PREDICTED: probable G-protein coupled receptor 101 [Leptonychotes weddellii] | 4.0e-09 |
| pfu_aug2.0_2738.1_28925.t1 | gi|557770965|ref|XP_005185145.1| | PREDICTED: octopamine receptor beta-2R [Musca domestica] | 6.0e-09 |
| pfu_aug2.0_2738.1_28925.t1 | gi|196005143|ref|XP_002112438.1| | hypothetical protein TRIADDRAFT_26040 [Trichoplax adhaerens] | 8.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_2738.1_28925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2738.1_28925.t1 atgtctagtggattcgtagatagttttggaggatctttcttccaatggtttcagactgatgttttgccttacatcatcgg cagtgtgtgtatcatcgtcttcatcgctacactcgtcctggatatcattcttatcatgacactaaaaaagaggggtatgt taaagtatccgtgtaacagattcgtgtttgagctagccgtgatggaccttctagctgcattctttgttgtcatcatttct ggagtcgttgcattcatgaaatcatgggaactgggatcatacgtgtgtagtacacatgcagtggcaattacttggttcta tcttgtgacatttggaatgcttaccgttttattccttgaaaggactattaaaataaagaagccagaactgtacgaacgga tttttcagtcatctagatgcgtcaatataatgtccataactgtttgggtggttgatctaggaattgcttgcatagcttta acagactgggtcaaagtggaatataacatgttccatgctgcttgtgtcgttaaatacgttgacaacgtgtactatctgat actaatatttatgcttggtgttggattctcgactatcacatgcttcatatgctacttcataatatttaaacacaaagtgg atacctttgaccaaaagaagaagaaaaaagataataacgcggatgcccctgatggaaattcaaaggccaagaatccattt gcattagcagctggaggtggtggtggtggtggcgtaggaggaggaggaggaaaaacaggagcaggatttggtggaaaatt aggccaaggtggaattggtggaaataaagcagggccaggtaaaacaccaagaaacaaactggctttaatggcagcaaaga agaaaataaggaaggcagtgacaaaagcaaaggtatccaaaatgttcagtttgacagacgataaagctgacccagagttt cacatggcggtaacatactttatcgtgtattgcttgatgatcgtctgctatgtgccttactttgctattaattttgccga ctacgacgacagcggtgagatatggggagggtattacacaattactgtaattttggtaatggtcagctattgtatgaagc ctataatatacctctctcacaacaaacattatcgtaaaggctataaggagacaatgcctgaaaaggtcattgtcaaggcc gtgaatgtaacaaaatctatcaacaaaatgatggacaaattagacaaagttatgtttaaaactcctgggaaaaagaagct tgacgcgacgctaacagttcactgggcagctaagagatggctgcgaaaagttagagccaagaggggtggcctaccattag gtcaagtgccgaaaaataacaaagccaatgatgtaccgaaaccgaatcctaaaaaagatactcctcgtagtggagcatca acagcttctccgactaaagtaaatgtggacacaatgccaggaaggcaaacccgacaagtatctaataatccgggcactgc ggtcttcgttgctcacaatgcttacaataatgaaccaggaactaagcctccagttttacgagaaaattcatggggagaat ttgtggatgagactaaaccaaactcaaattatcacaataatgaaaacgtgtatcgtgatgactttcaccaaaatcctgtg aaaccctatcaaaatcaacaaaataaggctccacaaacagactataggagacaggactcttggggagacttcatagatga gccggagccttctcgtcccaaggaacaatatcctaacaactcatacggaggaggcaacatcggaagaagggagagtatga gtcccggatccaaagtcatggctgtaggcattagtaatcaaaactatacgaatgatcaatactcgaatccgtataccaac cagaaatcaaagatgtcaagtattaattcatatcaaccaccttcacaaaataactatgatccgccctcttacggtaacaa cagacctgttaattcttatgaacctccgtcacaaaatcattatgatccacccccttttggtgacaacaaacgggccccac cacaggatgacgacgccgggatactctcactagagctgatctga |
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Protein
| Protein ID | pfu_aug2.0_2738.1_28925.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2738.1_28925.t1 MSSGFVDSFGGSFFQWFQTDVLPYIIGSVCIIVFIATLVLDIILIMTLKKRGMLKYPCNRFVFELAVMDLLAAFFVVIIS GVVAFMKSWELGSYVCSTHAVAITWFYLVTFGMLTVLFLERTIKIKKPELYERIFQSSRCVNIMSITVWVVDLGIACIAL TDWVKVEYNMFHAACVVKYVDNVYYLILIFMLGVGFSTITCFICYFIIFKHKVDTFDQKKKKKDNNADAPDGNSKAKNPF ALAAGGGGGGGVGGGGGKTGAGFGGKLGQGGIGGNKAGPGKTPRNKLALMAAKKKIRKAVTKAKVSKMFSLTDDKADPEF HMAVTYFIVYCLMIVCYVPYFAINFADYDDSGEIWGGYYTITVILVMVSYCMKPIIYLSHNKHYRKGYKETMPEKVIVKA VNVTKSINKMMDKLDKVMFKTPGKKKLDATLTVHWAAKRWLRKVRAKRGGLPLGQVPKNNKANDVPKPNPKKDTPRSGAS TASPTKVNVDTMPGRQTRQVSNNPGTAVFVAHNAYNNEPGTKPPVLRENSWGEFVDETKPNSNYHNNENVYRDDFHQNPV KPYQNQQNKAPQTDYRRQDSWGDFIDEPEPSRPKEQYPNNSYGGGNIGRRESMSPGSKVMAVGISNQNYTNDQYSNPYTN QKSKMSSINSYQPPSQNNYDPPSYGNNRPVNSYEPPSQNHYDPPPFGDNKRAPPQDDDAGILSLELI |
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