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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_2742.1_08957
Locus scaffold2742.1 : 24951 ... 42585 : -
To GenomeBrowser scaffold2742.1:24951..42585
Genes list of scaffold scaffold2742.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_2742.1_08957.t1 2 1 ABC_tran 31 174 1.7e-16 60.7 6.2e-19 1.8e-15 57.4
pfu_aug2.0_2742.1_08957.t1 2 2 ABC_tran 278 373 1.7e-16 60.7 0.15 440.0 1.1
pfu_aug2.0_2742.1_08957.t1 2 1 ABC2_membrane 359 563 2.1e-27 95.6 7.2e-31 2.1e-27 95.6
pfu_aug2.0_2742.1_08957.t1 2 2 ABC2_membrane 596 614 2.1e-27 95.6 1.2 3600.0 -3.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_2742.1_08957.t1 gi|665799622|ref|XP_008547733.1| PREDICTED: ABC transporter G family member 9 isoform X2 [Microplitis demolitor] 0.0
pfu_aug2.0_2742.1_08957.t1 gi|665799620|ref|XP_008547732.1| PREDICTED: ABC transporter G family member 9 isoform X1 [Microplitis demolitor] 0.0
pfu_aug2.0_2742.1_08957.t1 gi|645004739|ref|XP_008210592.1| PREDICTED: ABC transporter G family member 21 isoform X2 [Nasonia vitripennis] 0.0

Transcript
Transcript IDpfu_aug2.0_2742.1_08957.t1
Definition-
>pfu_aug2.0_2742.1_08957.t1
atgagtggtaatcggaaagaagaaaatcgcgatgacgatattgaaatcgttttcaggaatattaacgtaagcatagaagg
aaaacatattttgaagaatgtcacaggagtggcgagaccaggggaggtgctcggcgtgctaggaccgtcagattctggta
aatcggtcttattggcgacattagcaggacacagactgccttacataggggacgtgttggtgggcggggtccccctagag
caggcccgaggggaagtggcatacgtagaaaaatctgattatcttctaccatgcttaacactgagggaaacactagagta
ttccacaaaattgagactggggagtgctgtttcaccgtcagaacagaaccttcgtatttgtcaagtactggatcttatga
aactttccatgtttgagaacctactcgttcaatttcttccaaaagcagtgataaagagactgaacatcgcatgtgaaatt
ttgacgaacccttcagttattatactagatgagcctacctcttctatggattttaaggagggtttagatttactgaagac
attgaaacattacgcagagaaagctggcaaggttttggtcatttcgctggcggcgtctcctagttccttctataccttgt
gcagtagatgtttgtttctatacaaagggcatatagcttattacggaaatagcagagagatacgtcacttcctgtctaaa
atcgatctcacgccaatagacggataccacccagcagactacttattagagttacttaaccacgagactatggatgacgc
gttgcccatacaggaaaccattgtccagaccacgtatcaattaagaaaagaacctggctggaaaacggagacactactca
acaaatatcctgtcacgctttatacaaataaaaactttaatttcaaaccttatcaccagaatggtaattctcacgacgca
gatgatgaagagaatactatcacagacaacgatgagaggatagagatgcttcaggtcaaagaaacaaacgttgatgcagt
ggtaccaactagatacactacatcgtactgtcatcaattcaaaactcttttggcgcgaaatttcacgaatgccagacggc
gaatactgttcccaattagcctcgttcagaatctttacatcttggtcatctgtattcttatttggtggcgaccagagcgt
attgagaatactatccctgaccgcatgggtctgtttttctttacagtggtgcaatgggccttttttgctcttctggatgc
aattttaatttttcctaaagaaatgaaggtaatcaacaaggagagaaagcatggtcattacagattatcagctttttgtt
tatcaaagacagtgagtgagattcccctggctatcttacagccttgtatctatatgtgtgtcatgtattgggtggctaac
ctgaacggcgtcagagccttcctgtgttctgtaggagtcatcattgtcgatgtatttgctgcacagagtataggtttatt
tgtgggggctgcattacgtcctccgtggactgtaacagtggtatcccttggtcttctgtctatgatgttatggggcgggg
catttaacactccacctccatggttacgctggggaaaatttggatctttcttcttctatggtctcaacgctctcatcgtt
ctagagttcaagaatgctcctccgataaaatgtaaaccggacagtacacttcctgtatgtaacatgatcgatcctgtcac
aaatgccacgtttacggagtttgattctgggattgtcctgcaggttcagagcatagactggacggtgtggcagtacgtgt
ctgtgttactagggataatgttggttaccagattattgtggtatatagtcatgaggaggcagaaactctcatga

Protein
Protein IDpfu_aug2.0_2742.1_08957.t1
Definition-
>pfu_aug2.0_2742.1_08957.t1
MSGNRKEENRDDDIEIVFRNINVSIEGKHILKNVTGVARPGEVLGVLGPSDSGKSVLLATLAGHRLPYIGDVLVGGVPLE
QARGEVAYVEKSDYLLPCLTLRETLEYSTKLRLGSAVSPSEQNLRICQVLDLMKLSMFENLLVQFLPKAVIKRLNIACEI
LTNPSVIILDEPTSSMDFKEGLDLLKTLKHYAEKAGKVLVISLAASPSSFYTLCSRCLFLYKGHIAYYGNSREIRHFLSK
IDLTPIDGYHPADYLLELLNHETMDDALPIQETIVQTTYQLRKEPGWKTETLLNKYPVTLYTNKNFNFKPYHQNGNSHDA
DDEENTITDNDERIEMLQVKETNVDAVVPTRYTTSYCHQFKTLLARNFTNARRRILFPISLVQNLYILVICILIWWRPER
IENTIPDRMGLFFFTVVQWAFFALLDAILIFPKEMKVINKERKHGHYRLSAFCLSKTVSEIPLAILQPCIYMCVMYWVAN
LNGVRAFLCSVGVIIVDVFAAQSIGLFVGAALRPPWTVTVVSLGLLSMMLWGGAFNTPPPWLRWGKFGSFFFYGLNALIV
LEFKNAPPIKCKPDSTLPVCNMIDPVTNATFTEFDSGIVLQVQSIDWTVWQYVSVLLGIMLVTRLLWYIVMRRQKLS

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