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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_275.1_17219
Locus scaffold275.1 : 1 ... 26655 : -
To GenomeBrowser scaffold275.1:1..26655
Genes list of scaffold scaffold275.1
Synonym pfu_aug1.0_183.1_36349

Manual annotation
Annotation by Blast2GO
Annotation GO
glutamate--cysteine ligase regulatory subunit-like GO:0008152 GO:0044763 GO:0065007

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_275.1_17219.t1 gi|676444816|ref|XP_009050552.1| hypothetical protein LOTGIDRAFT_213728, partial [Lottia gigantea] 4.0e-27
pfu_aug2.0_275.1_17219.t1 gi|524898537|ref|XP_005105716.1| PREDICTED: glutamate--cysteine ligase regulatory subunit-like isoform X1 [Aplysia californica] 5.0e-22
pfu_aug2.0_275.1_17219.t1 gi|524898539|ref|XP_005105717.1| PREDICTED: glutamate--cysteine ligase regulatory subunit-like isoform X2 [Aplysia californica] 1.0e-21
pfu_aug2.0_275.1_17219.t1 gi|733900702|ref|XP_010714156.1| PREDICTED: glutamate--cysteine ligase regulatory subunit, partial [Meleagris gallopavo] 8.0e-18
pfu_aug2.0_275.1_17219.t1 gi|338725235|ref|XP_001491438.3| PREDICTED: glutamate--cysteine ligase regulatory subunit [Equus caballus] 2.0e-17

Transcript
Transcript IDpfu_aug2.0_275.1_17219.t1
Definition-
>pfu_aug2.0_275.1_17219.t1
atgatatatcaggactctgccatatgtgacgacaggattaaacctaagcgcaaagtctctagttccagccccagtgttac
tctaagtcaacaaccaacacagcaaaccatacagccatccttctttgtgtgcagttctaccaacgattgtagtaacttga
tgtgtactcttggattggatgtgaaatgtctcacttactatccagccaaagtctgcctttgtgccaacccacaaaatgga
ttgcaaaacacgtcagtgtggcctgtcatagtaggaagccatccaaccattgcacagacgacaagtggagacatcaaaac
cacaattttaagtactctccctagtatgagccaacagaccacatcgcagacgacacttggagatatcagatccacaactt
caagcaaagttattacgagtaccactaatcaaacaaccacattatctcgagattgtttacgtgatgaggactgtagtcca
tggtattgcgatagtccacaacaatctgtcagatgcctccacgaaacactattcctctggtccacagagcagttaacctg
ctgttgtactgataagaccgtgaactctcgccaatgcattccaaataccaaaccaaagtataaaggtgctggaactaaac
cacatagtaccaccctcagtcagctatcaacacagaaaatcgtattgccatccttctttgcgccatgcacagacgcttct
gactgcacagcacaaaatacacaaactataggaccttttggggctcttccgtgcacggcggccaacatgagggtctgcag
tcatggattttgttcatgcaacaattcattcggcccaccaacgtcagcgatgaaatcaacagccaccataacgtctactt
ctcatcctgtttcccatgttcctgctgcttcctgttatcagtgtggtagtgaggcatacccgtgctctgctatggacctt
tttgacaacacattaaagccaagccagtgtaccagcgataagccgttctgcatgactgatattggtcaccacgactcaaa
actatttgtttataaaagatgtgttgacgagtctacatgtaggagaaagtggttacaggaaacttctgatctagagtatt
gcatcaacctaatgaacaagctaagtgagtgtatgagagagaccttgtcaaaccatttgaaagaacaagataaaactgaa
ttgcaatatgtcacagaaattgattcacctcacgcaaaatacatggagaaactgccaagggacacgagaggagacttaaa
aataactctgaagtttttcatgtgtcgtctcttagaaccagcaaccataatgagagcaattcagattgctctaaaggaaa
tggacgtggatttcattgagacggttttactgtcgttcccggactttgaggacggtgccttaaccctcgaaaacattcag
ccgtactggaaagtcttagagaagttggtagaagatgaggttgtattagccttaggaatatctgatctcgataaatgttt
gctggaacaactgtatgattgggcacag

Protein
Protein IDpfu_aug2.0_275.1_17219.t1
Definition-
>pfu_aug2.0_275.1_17219.t1
MIYQDSAICDDRIKPKRKVSSSSPSVTLSQQPTQQTIQPSFFVCSSTNDCSNLMCTLGLDVKCLTYYPAKVCLCANPQNG
LQNTSVWPVIVGSHPTIAQTTSGDIKTTILSTLPSMSQQTTSQTTLGDIRSTTSSKVITSTTNQTTTLSRDCLRDEDCSP
WYCDSPQQSVRCLHETLFLWSTEQLTCCCTDKTVNSRQCIPNTKPKYKGAGTKPHSTTLSQLSTQKIVLPSFFAPCTDAS
DCTAQNTQTIGPFGALPCTAANMRVCSHGFCSCNNSFGPPTSAMKSTATITSTSHPVSHVPAASCYQCGSEAYPCSAMDL
FDNTLKPSQCTSDKPFCMTDIGHHDSKLFVYKRCVDESTCRRKWLQETSDLEYCINLMNKLSECMRETLSNHLKEQDKTE
LQYVTEIDSPHAKYMEKLPRDTRGDLKITLKFFMCRLLEPATIMRAIQIALKEMDVDFIETVLLSFPDFEDGALTLENIQ
PYWKVLEKLVEDEVVLALGISDLDKCLLEQLYDWAQ

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