Gene
| Gene Model ID | pfu_aug2.0_275.1_17221 |
|---|---|
| Locus | scaffold275.1 : 71795 ... 95315 : - |
| To GenomeBrowser | scaffold275.1:71795..95315 |
| Genes list of scaffold | scaffold275.1 |
| Synonym | pfu_aug1.0_20771.1_25890 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | AAA_30 | 2 | 127 | 5.9e-13 | 48.8 | 4.0e-15 | 3.8e-12 | 46.2 |
| pfu_aug2.0_275.1_17221.t1 | 2 | 1 | PIF1 | 5 | 118 | 1.2e-16 | 60.6 | 3.0e-15 | 2.8e-12 | 46.2 |
| pfu_aug2.0_275.1_17221.t1 | 2 | 2 | PIF1 | 244 | 276 | 1.2e-16 | 60.6 | 9.9e-05 | 0.092 | 11.6 |
| pfu_aug2.0_275.1_17221.t1 | 2 | 1 | vWA-TerF-like | 520 | 606 | 4.6e-06 | 26.5 | 0.028 | 26.0 | 4.5 |
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | VIT_2 | 914 | 979 | 7.1e-10 | 38.2 | 2.0e-12 | 1.9e-09 | 36.8 |
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | VIT | 914 | 994 | 3.0e-09 | 36.6 | 8.9e-12 | 8.2e-09 | 35.1 |
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | VWA_3 | 1129 | 1283 | 8.0e-27 | 93.8 | 2.2e-29 | 2.0e-26 | 92.5 |
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | VWA_2 | 1130 | 1290 | 2.1e-14 | 53.9 | 5.5e-17 | 5.1e-14 | 52.7 |
| pfu_aug2.0_275.1_17221.t1 | 1 | 1 | VWA | 1131 | 1285 | 5.4e-13 | 49.0 | 1.8e-15 | 1.7e-12 | 47.4 |
| pfu_aug2.0_275.1_17221.t1 | 2 | 2 | vWA-TerF-like | 1131 | 1263 | 4.6e-06 | 26.5 | 1.0e-06 | 0.00096 | 19.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_275.1_17221.t1 | gi|554577434|ref|XP_005880444.1| | PREDICTED: von Willebrand factor A domain-containing protein 5A-like isoform X1 [Myotis brandtii] | 0.0 |
| pfu_aug2.0_275.1_17221.t1 | gi|558168071|ref|XP_006098402.1| | PREDICTED: von Willebrand factor A domain-containing protein 5A-like [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_275.1_17221.t1 | gi|675694856|ref|XP_009005272.1| | PREDICTED: LOW QUALITY PROTEIN: von Willebrand factor A domain-containing protein 5A [Callithrix jacchus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_275.1_17221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17221.t1 atggatgaacaacagtttctcgtctacgaactgattgtaaagggccacaatgtggttgtatgtggccaggctgggactgg gaaaacatttttggttcaggaaactgtgaaatactttaaatctattggcaagttctatccgctgacagccactacggggt tagcagcctctctgtatggcgatggtgcatgtacgttgcataaatggatgggaatggaagatggtcggcattctaatgac gaacttatccaccttctcagaacggatgaacgcttagaaaaaccaaacgaaaatataaagaacacagatgttttaataat tgatgaggcatcaatgctaagtgcaaaaacactcggagatttctaccaacttcctcccgtgagaaatgaactttatggag attatggacattattgttttactgttaaatggttcaactctgcatttccacataaaccgtgcttaggaaaaatatacaga caagatgatccattgttagtgaaagccgtaaatgagctagagcaaggcactccctccacagagactattgcaatgatgca atcactagctcgtccgttgcctgatgaacaaagagaaaaagctatacatctatttgctcgtaatgatgatgtgttactgt ataactataaaaagatccaaagtgagcctgggcaactttttgtttttaaatctagtgatgatggtgacagacactatttg gataaaatcccagcgccgaaacaactgggtttaaaagttaatagcccagtaatgcttttagtcaacctaagtaatcaact ggtgaatggaaaaattggacacgtgaaccacattgagggcgaggatatttttgtaacctttattgtgtcgggcaggagta ttacagtaaagatcaataaatatgttttcacaaagtttgacccagttgagaaacgaaacattgcaaaaccacaaggcctg acaatagacaacttaataattgactgcaaaaatgccttttcacctggtcaaattggagtggctgtagggcgtgcaagatc tgtagagggtctatgtgtacttaacttcaagaagtccttgtgtcgcagtcatccagcaaatgtcaggcaattttacgaga cttgtggtgttggaaatgtttccagtgatatgagttgctgctcagctgaaattgaagaagaggaaaaaaatgtacagaaa gcagttgaatatattgatgacaacaaatcagatgatgatgatgatataaatgttgacagtggcgtagggaaagaggatga atttgattcagatattggactagatattattttatcggttgatgatatagaacggaaagatagaggaaaagatggtattg atgacatttttcaggagtcaattgaaaaatacactgacacacagataattaagcatgtcataaatttgaaaagtgaagtg aagaatccggatccatttttgaaaacctacgatcaccatcgagaggaaattatgaaaaaagcaaaggaaattttcccaca caacaaaagagagatgaaaatgaagctcctagaaagtttgagcgcaactgattgtgagctcagtgacagtgtggacccag aaagtttaattgaaacaagaaggagacaaaatattgctggaagtcttaccaatgttactgaagaagcctatcaatttttt acacagttagaacaaagtacaaggaaacatcttacatatgttaatttgtatgagcaaaaatcagaattcttcacagcagt tgaaacagctgttttaaatgacaattacctcttcacatctttgtcatctttattcactgatgaactaattcaaggacatg gcagtgaccatagcaacaccaatatatgtgattcttcatcaagatgtaacatttgcaaagcaattagagaccttcatagc aacataatgtcattatttgtaaaggtgtctgtgtctcaatttcgaagagatttcctatcagctcttagagttgagaaagg taaagctttaagagaaagagtgtccattcggaaggaaaagaagagctcaaaaatctttgactttgaatttattaagaaag acttcacagaggaaaagatgacctctcatttaagactacaaagtgaacttaaggccaatcctaagtatctctctaatttc tgcaataagagtaatttgttgttactttgcacagcatatggactgactgtagctaaaaataaatctaagaatgaaatttc cgagactctgagtcagaagattatgaattcaagtaaaatgacatgcatacaagccctctgtgatgacgcatcagctcaaa tcgaacacaatcaggatccacttccatctaccagccatgatccacaacctatcagtgaggacacacatgtattagatgta acacagattgccagtactagtacagaaaaggaccctacacatactacaaagtctgtgaaaaggaaacaagtttcaaggaa agggaaagggaagggcaagaaatcaaaaagcagaattgaatttccatgtggaatttgtgaccaggaatgtggatctgctg cagccatcagcttgcccgcattggatttccttgaaacggttggttgtccaagtataacagcattcatcgttctgcatctg ttatctgatgtgtctacgatgggtctgggatcacggaaattttctaccaagatacttgtatgctgtaaaagttctatagt acttgaaagtacatttgtagttcctctgacgagtacgtcaatctctgttacgattggtgcagctattggtcacgtggatt cagagctaacctaccttaatgacggagatgaggcagtggagaccgttttctcattcccattggacgaacagagcgccgtg tacaagtttcaggcagaaattgacggcaaaattatagtagcagagtgtcaggaaaaagaacaggggcggtccaactcgtc agggaggtccagccatggttttggcaaaaatatacgcaaacgggaaaaatcagcattttggcaaattacagggggagggg gggggggggnaaatccggcaaacccgtcaccggccccatcaggattcgcattcggattcggagcttcacagaaaccgtcc gtgtatgccagcacattgccgtacacaattaaattcagagcggatattcacagtagaaacaaaattcgagagattaaaac caattcggattggatgacaattgagtattctgattacaatacagtaggaaaggtttgtctcctatttaatcaatgcattg aatttgtcataaattgctttagtacatcaggtggtattttgagcaaggatgttttggcgctaagtttctaccctgacctt gataaagatgcgacaactttaggagagtttatttttgtcatcgaccgatctgggagtatgggaggaaataatataaagaa cgccaaagagactctacttcttcttctaaagagtctccccgttggttgttacttcaacgtcgtcagttttggtagtatgt acagcgtgctttttgacagtcaaagtgaaatgtacacggaatctagcctgacacgtgcaattcagttgcagcagacgatg aatgcagacatgggcggcacagaaattctccagccattacaggaaatctacctgaaatcgactattcccgaacatccacg acagatatttctacttactgatggaggagtggctaacacgaaggaggtcgtcaaacttgtaggtcaaaacgccaacaatt ctagagtattcgctgttggaataggagaaggagcttcaacgtcactagtgaagggcgtggctagagctgggcggggcaaa gctgtttttgtgaaaggagaagaccgcttacaagaaaaggtgatgtcattactgaagtgtgccatgcagccggtcgtgga tgacgtcagtgtggaatgggagttaccaaccaaagtgggcgtaaccaatattcctcagaccccgcccccaatctataatg aagaaaagaccgtcctatacgcgttgttaacaggatccgaagaactggtaacttttgatggtagactgaagcttaaaggg aaagctcaggggagagaatttgaatattgtttagacttcacagagagtcagccacagaataacgacgtaggtcctctccc aattcaccgtctggcagcgaaatctctcatcaaagagctggaggacaaagaactcaaagctgaaggtaaagagagcaagg aaaaaattactaaacaaattgtaaccgtgagcctatctgcaaacatcgcatcacgtcatacgtcatttgtgggcgtggac aaagacagcaaagtgaaagtagctgaattttttgacaatgattttccatttcagactgcattttttcaacaacagcaaca acagcaacatttgtatgggggaggtttgttctttaatagtgcgccaatgagggcgtcaacggcttttgcagcatccagta gcatggttcctcagggaagaagcatgggatgttttggatcgaaatctgcaacacctccatatttacagaagcagttcatt tcgtctgcaccacagcaacaacaaatgctttctaattcgtcaaacgctttcggatcaagtcaaggattctcatttggggg tccaatgccacctcctccccctccacaatcgtcttcttttggttttggatcgaccacaggcaatttttcctctgcattaa tgggtgcccctgccccaggggcacctccccctccccaggcttcttcatttggttttggctctaccacgggcaaattctcc tttggtgccccaccaccaccaccccctccccagtcctctgcatttggttttggatcatctaaggggaattctgtcgcctc ctttgggaactccaaggcaccaacctcttcttcacaatttagtttcggggcatcccagggaagtcccgcacctgctggcg ggttctttgctgcaaaatccaaagatcaaacccctacttttagttttggtggaccttcagccacatcatccaattcattt tctggacagagcaatttcggcaagaagtcgtctggctccgatacgtggtcaggagattgcttcgaattcggtacgagaca atctggtcaacagtcacaaagcttctttggtggaggtcctcaaaatcagacaatgccaacatccaatccaacaccactcg gagaagctggcgatgcaatgatgaagatagtgtcactacaaacatttgttggatcctggtccatgtcagaggagctttgt aaaacaattggaaaggatctttctaccttgaccagcagtgcaggcactcagaatatggaagtctgggcaaccgtgttggc gcttgcgtggttagaccggaactacagtcagaggaaaggagaatgggaaatgatagaaagtaaagcccgtcgatggttat tacaaacagtgaaagcagacgaagtatctagactgattgaatatgcaaaaggacttgtgtaa |
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Protein
| Protein ID | pfu_aug2.0_275.1_17221.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17221.t1 MDEQQFLVYELIVKGHNVVVCGQAGTGKTFLVQETVKYFKSIGKFYPLTATTGLAASLYGDGACTLHKWMGMEDGRHSND ELIHLLRTDERLEKPNENIKNTDVLIIDEASMLSAKTLGDFYQLPPVRNELYGDYGHYCFTVKWFNSAFPHKPCLGKIYR QDDPLLVKAVNELEQGTPSTETIAMMQSLARPLPDEQREKAIHLFARNDDVLLYNYKKIQSEPGQLFVFKSSDDGDRHYL DKIPAPKQLGLKVNSPVMLLVNLSNQLVNGKIGHVNHIEGEDIFVTFIVSGRSITVKINKYVFTKFDPVEKRNIAKPQGL TIDNLIIDCKNAFSPGQIGVAVGRARSVEGLCVLNFKKSLCRSHPANVRQFYETCGVGNVSSDMSCCSAEIEEEEKNVQK AVEYIDDNKSDDDDDINVDSGVGKEDEFDSDIGLDIILSVDDIERKDRGKDGIDDIFQESIEKYTDTQIIKHVINLKSEV KNPDPFLKTYDHHREEIMKKAKEIFPHNKREMKMKLLESLSATDCELSDSVDPESLIETRRRQNIAGSLTNVTEEAYQFF TQLEQSTRKHLTYVNLYEQKSEFFTAVETAVLNDNYLFTSLSSLFTDELIQGHGSDHSNTNICDSSSRCNICKAIRDLHS NIMSLFVKVSVSQFRRDFLSALRVEKGKALRERVSIRKEKKSSKIFDFEFIKKDFTEEKMTSHLRLQSELKANPKYLSNF CNKSNLLLLCTAYGLTVAKNKSKNEISETLSQKIMNSSKMTCIQALCDDASAQIEHNQDPLPSTSHDPQPISEDTHVLDV TQIASTSTEKDPTHTTKSVKRKQVSRKGKGKGKKSKSRIEFPCGICDQECGSAAAISLPALDFLETVGCPSITAFIVLHL LSDVSTMGLGSRKFSTKILVCCKSSIVLESTFVVPLTSTSISVTIGAAIGHVDSELTYLNDGDEAVETVFSFPLDEQSAV YKFQAEIDGKIIVAECQEKEQGRSNSSGRSSHGFGKNIRKREKSAFWQITGGGGGGXNPANPSPAPSGFAFGFGASQKPS VYASTLPYTIKFRADIHSRNKIREIKTNSDWMTIEYSDYNTVGKVCLLFNQCIEFVINCFSTSGGILSKDVLALSFYPDL DKDATTLGEFIFVIDRSGSMGGNNIKNAKETLLLLLKSLPVGCYFNVVSFGSMYSVLFDSQSEMYTESSLTRAIQLQQTM NADMGGTEILQPLQEIYLKSTIPEHPRQIFLLTDGGVANTKEVVKLVGQNANNSRVFAVGIGEGASTSLVKGVARAGRGK AVFVKGEDRLQEKVMSLLKCAMQPVVDDVSVEWELPTKVGVTNIPQTPPPIYNEEKTVLYALLTGSEELVTFDGRLKLKG KAQGREFEYCLDFTESQPQNNDVGPLPIHRLAAKSLIKELEDKELKAEGKESKEKITKQIVTVSLSANIASRHTSFVGVD KDSKVKVAEFFDNDFPFQTAFFQQQQQQQHLYGGGLFFNSAPMRASTAFAASSSMVPQGRSMGCFGSKSATPPYLQKQFI SSAPQQQQMLSNSSNAFGSSQGFSFGGPMPPPPPPQSSSFGFGSTTGNFSSALMGAPAPGAPPPPQASSFGFGSTTGKFS FGAPPPPPPPQSSAFGFGSSKGNSVASFGNSKAPTSSSQFSFGASQGSPAPAGGFFAAKSKDQTPTFSFGGPSATSSNSF SGQSNFGKKSSGSDTWSGDCFEFGTRQSGQQSQSFFGGGPQNQTMPTSNPTPLGEAGDAMMKIVSLQTFVGSWSMSEELC KTIGKDLSTLTSSAGTQNMEVWATVLALAWLDRNYSQRKGEWEMIESKARRWLLQTVKADEVSRLIEYAKGLV |
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