Gene
| Gene Model ID | pfu_aug2.0_275.1_17223 |
|---|---|
| Locus | scaffold275.1 : 99266 ... 100453 : + |
| To GenomeBrowser | scaffold275.1:99266..100453 |
| Genes list of scaffold | scaffold275.1 |
| Synonym | pfu_aug1.0_13062.1_10549 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_275.1_17223.t1 | 1 | 1 | Plant_tran | 58 | 230 | 6.4e-15 | 55.0 | 2.2e-17 | 8.1e-14 | 51.4 |
| pfu_aug2.0_275.1_17223.t1 | 1 | 1 | DDE_Tnp_4 | 72 | 222 | 4.7e-37 | 127.0 | 1.7e-40 | 6.5e-37 | 126.5 |
| pfu_aug2.0_275.1_17223.t1 | 1 | 1 | DDE_Tnp_1 | 166 | 222 | 2.6e-09 | 36.9 | 5.6e-10 | 2.1e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_275.1_17223.t1 | gi|642917351|ref|XP_008199266.1| | PREDICTED: putative nuclease HARBI1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_275.1_17223.t1 | gi|751235629|ref|XP_011171604.1| | PREDICTED: putative nuclease HARBI1 isoform X1 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_275.1_17223.t1 | gi|751235631|ref|XP_011171605.1| | PREDICTED: putative nuclease HARBI1 isoform X2 [Solenopsis invicta] | 0.0 |
| pfu_aug2.0_275.1_17223.t1 | gi|751232530|ref|XP_011169886.1| | PREDICTED: putative nuclease HARBI1 [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_275.1_17223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17223.t1 atgctatggtaccttagtacacaggaaacagcgcgatcaatatcagataggttcaatatacaggagtccactttcattct tcacaaccgaaggttactggatgtattcagcagtttgtgcaagaactttattgtgtggccaagtgatgctgaaaaacaac aggttcttagaggttttgaggcaatacagggatttcctggagtaattggagctgttgatggaacacatatagctattaca ccacctggtccaaatgaagctgattacgtcaacaggaaaagttaccattctataattttacaggcagtatgtaagcatga tagaagttttacagacataaactgtggctggccaggacgagtcaatgatgctcgtgttttcagaacctcgaatgtttgca agttccaatcacaactatgcggacaaaatcacctcattggggatggagcttatcatttatctcgcttcctaatgaagcct tatcgtgaaagtccaaaccttacacaagcagaacaactatttaacaaaaaactctatagcactaggtccgttatagaaca tgcctttggtatactgaaaacaagatttcggcgactccaacatattaacatgaacaaaatagaacatatcgtgaagacca ttgtgacctgttgtgtattgcataacatttgcatcataaaccatgatgatcttgatgaacactttgaagccgaggtggat gacaatattggaattgaattatctgcagacactgcggagggaaacctgaagcgccttttcttaactcgacaactgtga |
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Protein
| Protein ID | pfu_aug2.0_275.1_17223.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17223.t1 MLWYLSTQETARSISDRFNIQESTFILHNRRLLDVFSSLCKNFIVWPSDAEKQQVLRGFEAIQGFPGVIGAVDGTHIAIT PPGPNEADYVNRKSYHSIILQAVCKHDRSFTDINCGWPGRVNDARVFRTSNVCKFQSQLCGQNHLIGDGAYHLSRFLMKP YRESPNLTQAEQLFNKKLYSTRSVIEHAFGILKTRFRRLQHINMNKIEHIVKTIVTCCVLHNICIINHDDLDEHFEAEVD DNIGIELSADTAEGNLKRLFLTRQL |
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