Gene
| Gene Model ID | pfu_aug2.0_275.1_17231 |
|---|---|
| Locus | scaffold275.1 : 301442 ... 305193 : + |
| To GenomeBrowser | scaffold275.1:301442..305193 |
| Genes list of scaffold | scaffold275.1 |
| Synonym | pfu_aug1.0_5707.1_38195 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| neuropeptide f receptor isoform x1 | GO:0004930 GO:0007186 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_275.1_17231.t1 | 1 | 1 | 7TM_GPCR_Srw | 58 | 353 | 2.3e-07 | 30.2 | 1.3e-10 | 4.7e-07 | 29.2 |
| pfu_aug2.0_275.1_17231.t1 | 1 | 1 | 7TM_GPCR_Srsx | 60 | 350 | 1.5e-12 | 47.2 | 6.6e-16 | 2.5e-12 | 46.5 |
| pfu_aug2.0_275.1_17231.t1 | 1 | 1 | 7tm_1 | 66 | 336 | 0.0 | 183.4 | 0.0 | 0.0 | 182.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_275.1_17231.t1 | gi|676450581|ref|XP_009052425.1| | hypothetical protein LOTGIDRAFT_115283 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_275.1_17231.t1 | gi|524866111|ref|XP_005089880.1| | PREDICTED: neuropeptide F receptor-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_275.1_17231.t1 | gi|675873916|ref|XP_009022518.1| | hypothetical protein HELRODRAFT_67040 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_275.1_17231.t1 | gi|403183131|gb|EAT37369.2| | 0.0 | |
| pfu_aug2.0_275.1_17231.t1 | gi|118783456|ref|XP_313000.2| | AGAP004123-PA [Anopheles gambiae str. PEST] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_275.1_17231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17231.t1 atggacgaagaaattgacatgtacacaacggtgaccgcttctgaaaggaacgtgacagaccataatggaacaagtagcat aatgtccttcgaagacattcttaatatactacaagctatggacgggaaatttgatcagtcaaccgagagcttattcatct gttgtttctcggtgctaatcgtctttggagcgatgggaaatggattggtttgttacgtggttgctaggaacgctcatatg agaaccccacgaaatattttcattatcaatctggctatatcagatctcacgctgtgcctattcactcagcccatgaatct gtataggatgttgaaaaatcagtggcaattaggagaatttatgtgtaaattcgccccgatgttccagggaactaatgtgt ttgtctccacaatcagcattacagctattgcacttgacaggttccaagtcatagtctatcctaccaaagacagcatgaag aagattggggctgccgcagcacttctatccatatggataatatcttttcttatggctagtccactcatcatattttcagt tctcaacgagagtgacccgccaatccccggcgtgcctccattcagatactgtattgaagatacggatcttaatgaagaga aaggtgcttattccgtcgcctctatggtcgttcaatattttcttcccatcgtgatagtatctattgcccactttagaatc tgtaataaactcaaatacagaatggctaatcagcaacacgtagttgataccagatcaccattccagaagcggaaaagccg aaggcaatcacggagaaagagacgtactaatatcttactggcatccatcgccattatttttgcgctgagttggttgcctc tgaacattttcaatatattgtcggacttccgtttcacactttttcagcgtgacattaacattaatttagcttacgttgtc tgtcacatgttggtgttaagttccgcttgcaccaatccgttactgtatgggtggcttaatgagaatttcaggagcgagtt tatcaagattttatgttgtacatgctgtgtcaaattaagaaagatgatatctcgctgcttggggctccagaactctagta acgtcttgattgtttttacgaaggaggcgaacgggacgtcacacgtggacaacgacgctgtgtccatgacgtatcaacct acccagatgacgtcatgttatggattgtatttccagtga |
|
Protein
| Protein ID | pfu_aug2.0_275.1_17231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17231.t1 MDEEIDMYTTVTASERNVTDHNGTSSIMSFEDILNILQAMDGKFDQSTESLFICCFSVLIVFGAMGNGLVCYVVARNAHM RTPRNIFIINLAISDLTLCLFTQPMNLYRMLKNQWQLGEFMCKFAPMFQGTNVFVSTISITAIALDRFQVIVYPTKDSMK KIGAAAALLSIWIISFLMASPLIIFSVLNESDPPIPGVPPFRYCIEDTDLNEEKGAYSVASMVVQYFLPIVIVSIAHFRI CNKLKYRMANQQHVVDTRSPFQKRKSRRQSRRKRRTNILLASIAIIFALSWLPLNIFNILSDFRFTLFQRDININLAYVV CHMLVLSSACTNPLLYGWLNENFRSEFIKILCCTCCVKLRKMISRCLGLQNSSNVLIVFTKEANGTSHVDNDAVSMTYQP TQMTSCYGLYFQ |
|