Gene
| Gene Model ID | pfu_aug2.0_275.1_17233 |
|---|---|
| Locus | scaffold275.1 : 357495 ... 385496 : - |
| To GenomeBrowser | scaffold275.1:357495..385496 |
| Genes list of scaffold | scaffold275.1 |
| Synonym | pfu_aug1.0_15692.1_18245 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_275.1_17233.t1 | 6 | 1 | Agenet | 304 | 333 | 1.5e-08 | 34.6 | 0.36 | 670.0 | 0.5 |
| pfu_aug2.0_275.1_17233.t1 | 5 | 1 | TUDOR | 306 | 361 | 0.0 | 310.2 | 4.3e-16 | 8.0e-13 | 48.2 |
| pfu_aug2.0_275.1_17233.t1 | 5 | 2 | TUDOR | 477 | 596 | 0.0 | 310.2 | 3.0e-20 | 5.6e-17 | 61.7 |
| pfu_aug2.0_275.1_17233.t1 | 6 | 2 | Agenet | 540 | 568 | 1.5e-08 | 34.6 | 0.93 | 1700.0 | -0.8 |
| pfu_aug2.0_275.1_17233.t1 | 5 | 3 | TUDOR | 688 | 798 | 0.0 | 310.2 | 1.6e-15 | 3.0e-12 | 46.4 |
| pfu_aug2.0_275.1_17233.t1 | 6 | 3 | Agenet | 750 | 770 | 1.5e-08 | 34.6 | 0.17 | 310.0 | 1.6 |
| pfu_aug2.0_275.1_17233.t1 | 5 | 4 | TUDOR | 869 | 984 | 0.0 | 310.2 | 8.7e-26 | 1.6e-22 | 79.6 |
| pfu_aug2.0_275.1_17233.t1 | 6 | 4 | Agenet | 930 | 968 | 1.5e-08 | 34.6 | 7.7e-06 | 0.014 | 15.5 |
| pfu_aug2.0_275.1_17233.t1 | 5 | 5 | TUDOR | 1034 | 1154 | 0.0 | 310.2 | 2.6e-25 | 4.8e-22 | 78.0 |
| pfu_aug2.0_275.1_17233.t1 | 6 | 5 | Agenet | 1092 | 1128 | 1.5e-08 | 34.6 | 0.0017 | 3.1 | 7.9 |
| pfu_aug2.0_275.1_17233.t1 | 6 | 6 | Agenet | 1160 | 1173 | 1.5e-08 | 34.6 | 1.3 | 2500.0 | -1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_275.1_17233.t1 | gi|676450415|ref|XP_009052371.1| | hypothetical protein LOTGIDRAFT_159624 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_275.1_17233.t1 | gi|260829351|ref|XP_002609625.1| | hypothetical protein BRAFLDRAFT_125037 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_275.1_17233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17233.t1 gcagcgcacttagttctgttaatgtggatccaacaatttttcataccccagtgtcatcacatatgtcaaagactacaatg aagctgagcgacagatttgagaatttaaaaataactccctcggacagaggccgtaaaattgatgtgctagaagacaatat ccccctcgtggtacacacaaacgatgacgaaaacgacttagatgagatgggcagtgaatatggaggtggatatagggatt atgacttacagaggagggactacatgccatttaaccaatacggtagaggaggctatggaagggggcgtggccaatcattt ggatatgtgaatcatatgaacaagccaggatatgggcgtggttacggaggctatggaaactatcgggggaactacaacag accaatgggtaggggtggccatcagtacagacctccatattatcaacagcaaggaagacccatggggaggggcatgggta acttccagcagcagtacagacctcattaccacggacagcagtttcagaatgccccgtacagtcatcagggatctagacca gccaccaactctatcaactataaaccagctgatggaggaataacgcatatcaaacttatagatggaaatggggttgatgt aggagataaattgctgagtgaaggacttgttggaagtgtccaaacccagccagtgccgtccctgaggtcacctactggag gcacctcacaaaggtcaccagctggtgctactggaagtcagaaaacaccacaaaagtcacccaggatggcagctgaacaa aaaccttctatacctcccacaaaattaccgatgggaaatgaagttgatatatacaatcaggatcatacacaagtatcctg cccggctgtaggagatttcctggtgggtaactttatgggaaactggtatcgtctccaggtcaatcaagttatctccacgg acaagttccaggttacctacgtagattacgggaataaagaaacggtcagcttggctgagctgagataccttaaacctgac atgtgcatgatacctgcacaggcaatagaatgctgccttgatggtataagtgatcctaactggagccctgccagcataga gcgtgtgaaggaattggtacccccgactgtcactgccggtgtcctgtataaggcgaaagctgtgaaagatgatggaaaca ttacaagtattaaactaacagatggaaacggggatgatgtaggcaataaattactgagtgagggacttgttggaagaggt gtccaaactcagcaggtgccatccctgaagtcaccagtaggtggcgcctcacaaaggtcaccagcaagtgccactggagg tcagaggttatcacaggggtcaattacaacagtggcagaacagagatcacttataccatcaacaaatctacccatagggt ctgaagtagatgtgatagtgttggctgtaacaagtccagggagtatagtagtacaggtgtttgaccacgagatggtacag gctgctgtagatcaggacgctagaatgacggagatatacaatcaggatcatacacaagtatcctgcccggctgtaggaga tttcctggtgggtaactatatgggaaactggtatcgtctccaggtcaatcaagttatctcccctgacaagttccaggtta cctacgtagattacggcaataaagaaacggtcagcttggctgagatgagataccttaaaccagacatgctcaacataccc gctcaggccatagaatgttgcctggagggaataggtgatcctaactggagccctgccagtatagagcgtatcaaggaatt ggtaccaccgaccctcacagctggagtattatacaaggcaaaggctgtaagaatggagggaaacctttcatgcataaaac tactagatggaaatggagtggatataggagatacattgttgagtgagggacttgtatcaacggcagggaagaaaagtgaa gttttcatggctaagtccctgggtaatatatctgacttgatgactgagggaggtgagtttgacctgttcgtgattgacaa aaagccgccaaacagactggtatgccaggtcttgcacagggactatgtagaaatgttcacacagtttcagcaggcgttcc tcgaattgatggaaaaagatacttcaactgaatacaagcctcagtgtgtaggagagttggtagtgggtagattctcaggt gatcagatgtggtacagggctgaagtcttagctctaactgacaccaacgccacactgtgttatgtcgacttcggcaacaa agaacaagtgccgtttacaagtataagacatgccgttgaaatctgtactagactgcccatacagagttttgtttgtgttc ctgttaatcagtgttcattagagcaggctgtgaaaattagtgctgtggtcaagaaaaaagaaaattcagaagtactgata cagatacaagatgccatggcattgacgtcagaaaacacggaagaaactgtacaaaaagtagagaatgcaacacctagaaa aataatgtactctgatattcagaaaatacagctacctgtgaatggcagtaaggttgccatgacattttcagacgccagca gtttgtattcgtttcaccttagaaagtgtgattctgagagtcaggccgagttggacaaggtcatgaaagacgtgcatgaa tactgtacaaagaacgtggatccatataaaccggaggtgaacgagatggtatgtgttcagttttctgcagatggtgcatg gtatcgtggtcgagtcaccaacatagagggtgatgcgtattctgttcagtacgtggatcatggaaattcggagaatgttt caataaaagccatacggaagattgatcctagcctacttgttacgcctctacagtccgttcactgtcgagtagcggtagaa ttgttttcaagcgatggtgttagtattaacaatatgttcaaagtgatagcagcccctgttactgcttctgtcccatctcc cattacaaatggtgtaggcagcttgggaggaacgaaactagctgatatcgagagggtccaaccaaaggagcagtgtagtt tactgattacccatgttaatagcccaaaagatttctactgccagatagctgatgaagataacatacagctgttaggggtc ctcatgaacaacctggcattagaatgtgcagtagatactcccaatgacaactttaaaccagtggaaggagatctgtgctg tgctaaatatgaagtggacgatggctggtacagatcttttattaaggcagtacttggcgatgggcgatacagagtgcact atctggactttggaaacgagggtgtagtatccggtactggggttcatcctccatctgaggaattcttcaaactaccggtg atggcattccagtgctctttaataggcattgacccaagtgggtcatcatggaccccagcttcagtagccaagatgaatga attccaaatgcgagagctgtcagccatcataaagtccaaggagaaggatgtgctacaggtccaggtatcctgggagggga ctgacctggctgattgtctcgtacaggcggggttagccagaaaggctaccataggaccagctggtgatgcagctgccatg tctgaggaggaaaaggaggccatacaaagacagattgctcagttacaagctatgattgattccattgaacgtaaaataat aacattcaatataatggctgatattatacagcacagactgattaattcgtga |
|
Protein
| Protein ID | pfu_aug2.0_275.1_17233.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_275.1_17233.t1 SALSSVNVDPTIFHTPVSSHMSKTTMKLSDRFENLKITPSDRGRKIDVLEDNIPLVVHTNDDENDLDEMGSEYGGGYRDY DLQRRDYMPFNQYGRGGYGRGRGQSFGYVNHMNKPGYGRGYGGYGNYRGNYNRPMGRGGHQYRPPYYQQQGRPMGRGMGN FQQQYRPHYHGQQFQNAPYSHQGSRPATNSINYKPADGGITHIKLIDGNGVDVGDKLLSEGLVGSVQTQPVPSLRSPTGG TSQRSPAGATGSQKTPQKSPRMAAEQKPSIPPTKLPMGNEVDIYNQDHTQVSCPAVGDFLVGNFMGNWYRLQVNQVISTD KFQVTYVDYGNKETVSLAELRYLKPDMCMIPAQAIECCLDGISDPNWSPASIERVKELVPPTVTAGVLYKAKAVKDDGNI TSIKLTDGNGDDVGNKLLSEGLVGRGVQTQQVPSLKSPVGGASQRSPASATGGQRLSQGSITTVAEQRSLIPSTNLPIGS EVDVIVLAVTSPGSIVVQVFDHEMVQAAVDQDARMTEIYNQDHTQVSCPAVGDFLVGNYMGNWYRLQVNQVISPDKFQVT YVDYGNKETVSLAEMRYLKPDMLNIPAQAIECCLEGIGDPNWSPASIERIKELVPPTLTAGVLYKAKAVRMEGNLSCIKL LDGNGVDIGDTLLSEGLVSTAGKKSEVFMAKSLGNISDLMTEGGEFDLFVIDKKPPNRLVCQVLHRDYVEMFTQFQQAFL ELMEKDTSTEYKPQCVGELVVGRFSGDQMWYRAEVLALTDTNATLCYVDFGNKEQVPFTSIRHAVEICTRLPIQSFVCVP VNQCSLEQAVKISAVVKKKENSEVLIQIQDAMALTSENTEETVQKVENATPRKIMYSDIQKIQLPVNGSKVAMTFSDASS LYSFHLRKCDSESQAELDKVMKDVHEYCTKNVDPYKPEVNEMVCVQFSADGAWYRGRVTNIEGDAYSVQYVDHGNSENVS IKAIRKIDPSLLVTPLQSVHCRVAVELFSSDGVSINNMFKVIAAPVTASVPSPITNGVGSLGGTKLADIERVQPKEQCSL LITHVNSPKDFYCQIADEDNIQLLGVLMNNLALECAVDTPNDNFKPVEGDLCCAKYEVDDGWYRSFIKAVLGDGRYRVHY LDFGNEGVVSGTGVHPPSEEFFKLPVMAFQCSLIGIDPSGSSWTPASVAKMNEFQMRELSAIIKSKEKDVLQVQVSWEGT DLADCLVQAGLARKATIGPAGDAAAMSEEEKEAIQRQIAQLQAMIDSIERKIITFNIMADIIQHRLINS |
|