Gene
| Gene Model ID | pfu_aug2.0_2754.1_15616 |
|---|---|
| Locus | scaffold2754.1 : 22336 ... 26829 : + |
| To GenomeBrowser | scaffold2754.1:22336..26829 |
| Genes list of scaffold | scaffold2754.1 |
| Synonym | pfu_aug1.0_2580.1_58960 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_2754.1_15616.t1 | 3 | 1 | Nodulin-like | 5 | 154 | 6.0e-12 | 45.3 | 6.6e-14 | 2.5e-10 | 40.0 |
| pfu_aug2.0_2754.1_15616.t1 | 3 | 1 | MFS_1 | 9 | 164 | 4.4e-33 | 114.4 | 1.2e-19 | 4.6e-16 | 58.4 |
| pfu_aug2.0_2754.1_15616.t1 | 3 | 2 | MFS_1 | 243 | 517 | 4.4e-33 | 114.4 | 1.2e-19 | 4.5e-16 | 58.5 |
| pfu_aug2.0_2754.1_15616.t1 | 3 | 2 | Nodulin-like | 244 | 328 | 6.0e-12 | 45.3 | 2.4e-05 | 0.089 | 12.0 |
| pfu_aug2.0_2754.1_15616.t1 | 3 | 3 | Nodulin-like | 430 | 504 | 6.0e-12 | 45.3 | 0.21 | 770.0 | -0.9 |
| pfu_aug2.0_2754.1_15616.t1 | 3 | 3 | MFS_1 | 507 | 568 | 4.4e-33 | 114.4 | 0.00042 | 1.6 | 7.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_2754.1_15616.t1 | gi|676470282|ref|XP_009058799.1| | hypothetical protein LOTGIDRAFT_164054 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_2754.1_15616.t1 | gi|673022664|ref|XP_008865293.1| | hypothetical protein H310_03272 [Aphanomyces invadans] | 3.0e-18 |
Transcript
| Transcript ID | pfu_aug2.0_2754.1_15616.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2754.1_15616.t1 atgagttcgatgggcaactttggaatatcattcggaattcccgctggatttttgtgtgagcgttttggcgccagaattac gtcactcgcagcacttgttatttcttgtctcgggtacatgctgctttatagtacaacgttaatgatcgaagtctataagt caaaggcctggttacagtatttgtacttctttctcgcaggatttggttctatcttcatgtacatggcttctctgacgaca agtatgaacaattttcatccaaagcatagagggaaaatcgtcggcatacttgatgcttcatttagcggaggtccagcttt gttctcggcattatatggtgctctctttgcggtcggacatgtcaaagatgaagcacatcagaacttatcaggattttact tcatgactgctatatgttttgcatgcgttggtctactcggagcattgactctcaagccgtattcatatgaatcaagcgaa tctgatgttaccacagttattgacaaagatgagctcaacaattttgattcatccgtaaattcgcctctagaagtccaaaa gaaacaacaggatatcacaggactaccgcttgtgaaacgatttgactttcactatttaatttggggttatcaaccccatt gcagggatcgtttcaaaatttttgcaggattcttatcagatgccattcaccanaaaacctcagaactgagctgcacagac agatttggttctatcttcatgtacatggcttctctgacgacgagtatgaacaattttcacccaaagcatagagggaaaat cgtcggtattcttgatgcttcattcagcggaggtccagctttgttctcggcattatacggtgctctctttgcggtcggcc atgtcaaagatgaagccaatcagaacctatcagggttttacttcatgactgctatatgttttgcatgcgttggtctactc ggagcattgactctcaagccgtattcatatgaatcaagcgaatctgatgttaccacagttattgacaaagatgagctcaa caattttgattcatccgtaaattcgcctctagaagtccaaaagaaacaacaggatatcacaggactaccgcttgtgaaac gatttgattttcattatttaatttgggggtatatattttgtgctggattgcagcttgtttatcaatcaaaccaggggaca tatctaaagtctttcactttagaacaatataccacactttttactgttatcaaccccattgcagggatcgtttcaaaatt ttttgcaggattcttatcagatgccattcaccataaagtcccgcgtgcggccgttttattagcgttcaatgtggtgcaaa caatatcgttagccatttcaatattcttttctgacaaactttttgtttttgccattgtcaacgttatcattggatttgca aacggggctgtctggtgcttaacgccaaccatgatcagcgaattttacggaatgaaatttttcgcgcgaaactggggtgc gatgatgttaggaaatgcgtttggtggattagccttatcagagtcatttggttggatatataaaagcaacattacctcgc ctgatgctacagactgctatggtatttcgtgtttcacatggagttttatattgtttgcaggattaagttttaacgcatgt atacttgaagtggctcttctgaaaaagaaattagacgagaagaaatattcaggggaggatccgaatgtggaaatgtgttg ccctggtgctgatacatccgacagatattga |
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Protein
| Protein ID | pfu_aug2.0_2754.1_15616.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_2754.1_15616.t1 MSSMGNFGISFGIPAGFLCERFGARITSLAALVISCLGYMLLYSTTLMIEVYKSKAWLQYLYFFLAGFGSIFMYMASLTT SMNNFHPKHRGKIVGILDASFSGGPALFSALYGALFAVGHVKDEAHQNLSGFYFMTAICFACVGLLGALTLKPYSYESSE SDVTTVIDKDELNNFDSSVNSPLEVQKKQQDITGLPLVKRFDFHYLIWGYQPHCRDRFKIFAGFLSDAIHXKTSELSCTD RFGSIFMYMASLTTSMNNFHPKHRGKIVGILDASFSGGPALFSALYGALFAVGHVKDEANQNLSGFYFMTAICFACVGLL GALTLKPYSYESSESDVTTVIDKDELNNFDSSVNSPLEVQKKQQDITGLPLVKRFDFHYLIWGYIFCAGLQLVYQSNQGT YLKSFTLEQYTTLFTVINPIAGIVSKFFAGFLSDAIHHKVPRAAVLLAFNVVQTISLAISIFFSDKLFVFAIVNVIIGFA NGAVWCLTPTMISEFYGMKFFARNWGAMMLGNAFGGLALSESFGWIYKSNITSPDATDCYGISCFTWSFILFAGLSFNAC ILEVALLKKKLDEKKYSGEDPNVEMCCPGADTSDRY |
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