Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_276.1_20543
Locus scaffold276.1 : 118836 ... 121930 : +
To GenomeBrowser scaffold276.1:118836..121930
Genes list of scaffold scaffold276.1
Synonym pfu_aug1.0_66447.1_20389

Manual annotation
Annotation by Blast2GO
Annotation GO
katanin p60 atpase-containing subunit a-like 1 GO:0005488 GO:0015630 GO:0044430 GO:0044763

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_276.1_20543.t1 gi|676461791|ref|XP_009056057.1| hypothetical protein LOTGIDRAFT_206522 [Lottia gigantea] 0.0
pfu_aug2.0_276.1_20543.t1 gi|156401368|ref|XP_001639263.1| predicted protein [Nematostella vectensis] 0.0
pfu_aug2.0_276.1_20543.t1 gi|524873129|ref|XP_005093317.1| PREDICTED: katanin p60 ATPase-containing subunit A1-like [Aplysia californica] 0.0
pfu_aug2.0_276.1_20543.t1 gi|47551109|ref|NP_999733.1| katanin p60 ATPase-containing subunit A1 [Strongylocentrotus purpuratus] 0.0
pfu_aug2.0_276.1_20543.t1 gi|260784200|ref|XP_002587156.1| hypothetical protein BRAFLDRAFT_115817 [Branchiostoma floridae] 0.0

Transcript
Transcript IDpfu_aug2.0_276.1_20543.t1
Definition-
>pfu_aug2.0_276.1_20543.t1
atgaacaacattctcggtgagatcagtgagaacgccaagatgggccgagagaatgcgttgtttggtaactacgacacgtc
actggtatattaccagggagttatacagcagatacagagattactgtctacaacaaaggaatctgataaacgacgtcagt
ggatggaggttagagatatgataacgacagaatatgagcagatcaaggagatatcggaaacactgtccagctttaagagc
tccgcccctcgggcccatcatgtccctgatcaggacttcggcagccccttcggtggggactattattctaaacacgagga
gccgacgagagacccggatgtctggcctccacctacaccatcagaatctagaccctccccaaacatacgagggggagcac
cgaacaagaacatgaggagaccagagccccagagagggagggctcctcccagcagaccagcaccagggagggggagacca
ggagggggaaattatggtggtaactatggtagggacagacctggacaaggaaataaagacaaaaacaaaaagcaaggaga
agatggtgagaagaagtttgatccgacaggctatgataaggacttagtagaaaatctagagagagatatagtacagaaaa
atcctaatgttagttgggatgatatagcagatttagtagaagccaaggcattactaaaggaagctgttgttttaccacta
gtcattcctgacttcttcaagggcattaggcgaccatggagagtaagttatagtgttctcaaatgtatggaatga

Protein
Protein IDpfu_aug2.0_276.1_20543.t1
Definition-
>pfu_aug2.0_276.1_20543.t1
MNNILGEISENAKMGRENALFGNYDTSLVYYQGVIQQIQRLLSTTKESDKRRQWMEVRDMITTEYEQIKEISETLSSFKS
SAPRAHHVPDQDFGSPFGGDYYSKHEEPTRDPDVWPPPTPSESRPSPNIRGGAPNKNMRRPEPQRGRAPPSRPAPGRGRP
GGGNYGGNYGRDRPGQGNKDKNKKQGEDGEKKFDPTGYDKDLVENLERDIVQKNPNVSWDDIADLVEAKALLKEAVVLPL
VIPDFFKGIRRPWRVSYSVLKCME

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495