Gene
| Gene Model ID | pfu_aug2.0_276.1_20552 |
|---|---|
| Locus | scaffold276.1 : 215456 ... 218743 : - |
| To GenomeBrowser | scaffold276.1:215456..218743 |
| Genes list of scaffold | scaffold276.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| four and a half lim domains protein 2-like isoform x4 | GO:0003700 GO:0005634 GO:0008270 GO:0050832 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_276.1_20552.t1 | 3 | 1 | LIM | 6 | 47 | 4.5e-35 | 119.5 | 6.4e-15 | 3.2e-11 | 43.1 |
| pfu_aug2.0_276.1_20552.t1 | 3 | 2 | LIM | 51 | 106 | 4.5e-35 | 119.5 | 3.9e-18 | 1.9e-14 | 53.4 |
| pfu_aug2.0_276.1_20552.t1 | 3 | 3 | LIM | 110 | 164 | 4.5e-35 | 119.5 | 1.5e-12 | 7.5e-09 | 35.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_276.1_20552.t1 | gi|524896250|ref|XP_005104602.1| | PREDICTED: four and a half LIM domains protein 2-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_276.1_20552.t1 | gi|675882620|ref|XP_009026812.1| | hypothetical protein HELRODRAFT_114881 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_276.1_20552.t1 | gi|684409258|ref|XP_009175689.1| | hypothetical protein T265_10911 [Opisthorchis viverrini] | 0.0 |
| pfu_aug2.0_276.1_20552.t1 | gi|675874080|ref|XP_009022600.1| | hypothetical protein HELRODRAFT_95167 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_276.1_20552.t1 | gi|170592875|ref|XP_001901190.1| | limpet [Brugia malayi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_276.1_20552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_276.1_20552.t1 atgaaaaagttcgaatacaagggaaaacaatggcacgaggaatgtttcgtctgcatgatatgcaagcagccaatcagaaa caagagcttcataccacgtgataacgaggttgtttgtgtcccatgttacgaagaacaatttgcacagaaatgcagcaagt gtaaaggggtaatcaacaaaggaggcgtggcctataagaaccagccttggcatagggaatgtttcacgtgtaccacatgt aataaggagttggctaaggaaaagtttacatctaaggatgatcagccttactgtgccgagtgttacggtgaccagttcgc caagaaatgctgtagatgtgtcaagccaatcacaggttttggagggacgaagtttatctcgtttgaggaccgtcattggc acagtgattgttttgtgtgttataagtgtgaggcctccatggttggtaggggtttccttatgaacgacaatgatattcta tgcccagagtgtggtcgtagttag |
|
Protein
| Protein ID | pfu_aug2.0_276.1_20552.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_276.1_20552.t1 MKKFEYKGKQWHEECFVCMICKQPIRNKSFIPRDNEVVCVPCYEEQFAQKCSKCKGVINKGGVAYKNQPWHRECFTCTTC NKELAKEKFTSKDDQPYCAECYGDQFAKKCCRCVKPITGFGGTKFISFEDRHWHSDCFVCYKCEASMVGRGFLMNDNDIL CPECGRS |
|