Gene
| Gene Model ID | pfu_aug2.0_276.1_20553 |
|---|---|
| Locus | scaffold276.1 : 219051 ... 264833 : - |
| To GenomeBrowser | scaffold276.1:219051..264833 |
| Genes list of scaffold | scaffold276.1 |
| Synonym | pfu_aug1.0_76976.1_27746 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prickle-like protein 3 isoform x4 | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_276.1_20553.t2 | 5 | 1 | LIM | 70 | 79 | 7.2e-15 | 54.7 | 2.0 | 15000.0 | -5.4 |
| pfu_aug2.0_276.1_20553.t2 | 1 | 1 | PET | 114 | 206 | 1.2e-25 | 89.1 | 3.4e-29 | 2.5e-25 | 88.1 |
| pfu_aug2.0_276.1_20553.t2 | 5 | 2 | LIM | 213 | 273 | 7.2e-15 | 54.7 | 3.6e-11 | 2.6e-07 | 30.5 |
| pfu_aug2.0_276.1_20553.t2 | 5 | 3 | LIM | 278 | 289 | 7.2e-15 | 54.7 | 0.17 | 1300.0 | -0.5 |
| pfu_aug2.0_276.1_20553.t2 | 5 | 4 | LIM | 396 | 438 | 7.2e-15 | 54.7 | 1.4e-13 | 1.0e-09 | 38.2 |
| pfu_aug2.0_276.1_20553.t2 | 5 | 5 | LIM | 442 | 452 | 7.2e-15 | 54.7 | 0.25 | 1800.0 | -1.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_276.1_20553.t2 | gi|675891436|ref|XP_009031220.1| | hypothetical protein HELRODRAFT_71169, partial [Helobdella robusta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_276.1_20553.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_276.1_20553.t1 atgtggaacctggaggaaggggcgataatcggagagcagcccaagatcgtggagactggggcggaactgaccaacatcct acagggacagtccctggcgatccccgaggacctggatctggatcttactgtcttccgtgaacgagtaaaagtggatgatg gtcagccatgtttggcatgtggagacagatgtcagggatacactccacacaaatggaggaattcctgtcatgggtgcaga tgtcctcgggacttacacgacatctacaatgaaaacttcgtcaacatccgggaccgcttagggtggaaacgtcaggatga tccaaacatccaagtcaccaaggaccgcaccctgaaagaggggtatacatgggtcccacccggactctcgtctgatcaga tagatgagtatatggaccagttacctaaccataaaatacctcgtctaggtacgcctggtgagcgttatagggacttacaa atcatacgtcaacttccaaaacaagatctctctatagacttctgtaagatgctttgttctgacgtggaaaagaaggaata taatatattccgggagctaagagataatatcgccatggatatagcttttgtaaaagaatctccagttttatcaatgtgtt accattgtaaaggggaaatcgaggagacggagctagcggtcttcgcccccaagtttggccctgatatttgctggcacccg gcatgttttgtctgctcaatctgcgaggagttactagtagatctaacctactgctgtcacagcaaaaacttactgtgtga aagacattatgccgaacaaatcagaccccgatgtcccgcctgtgatgaggaagttcaaagagacagcgacatggcaaaga acggcgcggatcccgagagggtggagggcgccctggccgaaatgaacacgttggtggaggccatagaagccgagaaacaa cccacggatctgtcctataaggatcgtcactggcatgaattctgcttcaaatgttgtgaatgtcagaaatccctggtaga tcaacccttcgctccaaagaacgataagatttactgttcggactgctacgacaagaacttcgctgcgagatgcgacggat gtggcgaacctttcaaaggagactatagatgtatcttaacgttagaatgctag |
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| Transcript ID | pfu_aug2.0_276.1_20553.t2 |
| Definition | - |
>pfu_aug2.0_276.1_20553.t2 atgtggaacctggaggaaggggcgataatcggagagcagcccaagatcgtggagactggggcggaactgaccaacatcct acagggacagtccctggcgatccccgaggacctggatctggatcttactgtcttccgtgaacgagtaaaagtggatgatg gtcagccatgtttggcatgtggagacagatgtcagggatacactccacacaaatggaggaattcctgtcatgggtgcaga tgtcctcgggacttacacgacatctacaatgaaaacttcgtcaacatccgggaccgcttagggtggaaacgtcaggatga tccaaacatccaagtcaccaaggaccgcaccctgaaagaggggtatacatgggtcccacccggactctcgtctgatcaga tagatgagtatatggaccagttacctaaccataaaatacctcgtctaggtacgcctggtgagcgttatagggacttacaa atcatacgtcaacttccaaaacaagatctctctatagacttctgtaagatgctttgttctgacgtggaaaagaaggaata taatatattccgggagctaagagataatatcgccatggatatagcttttgtaaaagaatctccagttttatcaatgtgtt accattgtaaaggggaaatcgaggagacggagctagcggtcttcgcccccaagtttggccctgatatttgctggcacccg gcatgttttgtctgctcaatctgcgaggagttactagtagatctaacctactgctgtcacagcaaaaacttactgtgtga aagacattatgccgaacaaatcagaccccgatgtcccgcctgtgatgaggaagttcaaagagacagcgacatggcaaaga acggcgcggatcccgagagggtggagggcgccctggccgaaatgaacacgttggtggaggccatagaagccgagaaacaa cccacgcagttattaacattgacacatgggggttctctattgtttcttggatttcgatgcgactttcggtttgattcctc ctcttgtttgtttgcttgtaaacacctgttaggaatatttctattaccaggggagtacgatatcttacataaccatcaca ttcctccccacttactgaatttatcaaagagttctaccatacccaccagagattataaggatctgtcctataaggatcgt cactggcatgaattctgcttcaaatgttgtgaatgtcagaaatccctggtagatcaacccttcgctccaaagaacgataa gatttactgttcggactgctacgacaagaacttcgctgcgagatgcgacggatgtggcgaacctttcaaaggaggggacg aggagcgagggattgaagactatagatgtatcttaacgttagaatgctag |
|
Protein
| Protein ID | pfu_aug2.0_276.1_20553.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_276.1_20553.t1 MWNLEEGAIIGEQPKIVETGAELTNILQGQSLAIPEDLDLDLTVFRERVKVDDGQPCLACGDRCQGYTPHKWRNSCHGCR CPRDLHDIYNENFVNIRDRLGWKRQDDPNIQVTKDRTLKEGYTWVPPGLSSDQIDEYMDQLPNHKIPRLGTPGERYRDLQ IIRQLPKQDLSIDFCKMLCSDVEKKEYNIFRELRDNIAMDIAFVKESPVLSMCYHCKGEIEETELAVFAPKFGPDICWHP ACFVCSICEELLVDLTYCCHSKNLLCERHYAEQIRPRCPACDEEVQRDSDMAKNGADPERVEGALAEMNTLVEAIEAEKQ PTDLSYKDRHWHEFCFKCCECQKSLVDQPFAPKNDKIYCSDCYDKNFAARCDGCGEPFKGDYRCILTLEC |
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| Protein ID | pfu_aug2.0_276.1_20553.t2 |
| Definition | - |
>pfu_aug2.0_276.1_20553.t2 MWNLEEGAIIGEQPKIVETGAELTNILQGQSLAIPEDLDLDLTVFRERVKVDDGQPCLACGDRCQGYTPHKWRNSCHGCR CPRDLHDIYNENFVNIRDRLGWKRQDDPNIQVTKDRTLKEGYTWVPPGLSSDQIDEYMDQLPNHKIPRLGTPGERYRDLQ IIRQLPKQDLSIDFCKMLCSDVEKKEYNIFRELRDNIAMDIAFVKESPVLSMCYHCKGEIEETELAVFAPKFGPDICWHP ACFVCSICEELLVDLTYCCHSKNLLCERHYAEQIRPRCPACDEEVQRDSDMAKNGADPERVEGALAEMNTLVEAIEAEKQ PTQLLTLTHGGSLLFLGFRCDFRFDSSSCLFACKHLLGIFLLPGEYDILHNHHIPPHLLNLSKSSTIPTRDYKDLSYKDR HWHEFCFKCCECQKSLVDQPFAPKNDKIYCSDCYDKNFAARCDGCGEPFKGGDEERGIEDYRCILTLEC |
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