Gene
| Gene Model ID | pfu_aug2.0_277.1_23789 |
|---|---|
| Locus | scaffold277.1 : 13647 ... 21185 : - |
| To GenomeBrowser | scaffold277.1:13647..21185 |
| Genes list of scaffold | scaffold277.1 |
| Synonym | pfu_aug1.0_12130.1_68451 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sphingolipid delta -desaturase des1 | GO:0006629 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_277.1_23789.t1 | 1 | 1 | FA_desaturase | 29 | 249 | 9.1e-27 | 94.1 | 9.5e-31 | 1.4e-26 | 93.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_277.1_23789.t1 | gi|676451698|ref|XP_009052791.1| | hypothetical protein LOTGIDRAFT_150030 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_277.1_23789.t1 | gi|524869211|ref|XP_005091402.1| | PREDICTED: sphingolipid delta(4)-desaturase DES1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_277.1_23789.t1 | gi|675873746|ref|XP_009022433.1| | hypothetical protein HELRODRAFT_66489 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_277.1_23789.t1 | gi|156360564|ref|XP_001625097.1| | predicted protein [Nematostella vectensis] | 0.0 |
| pfu_aug2.0_277.1_23789.t1 | gi|156360566|ref|XP_001625098.1| | predicted protein [Nematostella vectensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_277.1_23789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23789.t1 atgggaagtgacccttctctcaagtataaagtgtgtgtgttggtgttcctccagttcttgggggtttatctagtccatga ccagccttggtgggtcgtcttcataatgtcatatatctatggtggcaccatcaaccactctctcactctcgcaatacacg aaatagcgcataatctagcatttggacatggccgtccgctagcaaacagagctctcggaatgttcgcgaatttacctata ggactacctatgtctgtgtctttcaaaaagtaccatctcgagcaccaccgttaccaaggcgacgagaaaaaagacgtgga tataccttgcaaattcgaaggaaatttcttcaataacactttcctgaagttgatatgggtggttttacagccatatttct atacattcaggccactttttatacgaccgatgccagtatctcatctagaagttatcaatttcatagtacagttttcattt gacgctttattgtacaagtatctaggattaaaagcagtattctattttatacaaggtaccttccttggtacaggcctaca tcccctttctggacacttcatttccgagcactatatgttcatcaaaggccaagaaacctactcgtattatggaccgctga atctcctaaccttcaatgttggttatcataatgaacaccacgactttcctagcatccctggaaccaggttaccacaggtg aagaagatagcgccggagtattacgacaatttaccgcactacgactcgtgggtcagtgtcatttataatttcatcacgga tccaacggttggaccatattcacgcgtgcgcagaaacattagagagagaggaagtactgtcaatggcacatcggagtcaa acggaacaacaaatggcaaagtacatacggagtaa |
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Protein
| Protein ID | pfu_aug2.0_277.1_23789.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_277.1_23789.t1 MGSDPSLKYKVCVLVFLQFLGVYLVHDQPWWVVFIMSYIYGGTINHSLTLAIHEIAHNLAFGHGRPLANRALGMFANLPI GLPMSVSFKKYHLEHHRYQGDEKKDVDIPCKFEGNFFNNTFLKLIWVVLQPYFYTFRPLFIRPMPVSHLEVINFIVQFSF DALLYKYLGLKAVFYFIQGTFLGTGLHPLSGHFISEHYMFIKGQETYSYYGPLNLLTFNVGYHNEHHDFPSIPGTRLPQV KKIAPEYYDNLPHYDSWVSVIYNFITDPTVGPYSRVRRNIRERGSTVNGTSESNGTTNGKVHTE |
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